Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04992 and BSU33460

See Amino acid alignment / Visit BSNT_04992 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:34
# Commandline: needle
#    -asequence dna-align/BSNT_04992___yvgT.1.22522.seq
#    -bsequence dna-align/BSU33460___yvgT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04992___yvgT-BSU33460___yvgT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04992___yvgT-BSU33460___yvgT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04992___yvgT
# 2: BSU33460___yvgT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 612
# Identity:     597/612 (97.5%)
# Similarity:   597/612 (97.5%)
# Gaps:           3/612 ( 0.5%)
# Score: 2926.0
# 
#
#=======================================

BSNT_04992___      1 ATGGCTTGGGAGCTGCTCAGTGTGATTGGCATCATTGCGTTTGCAGTCAG     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU33460___yv      1 ATGGCTTGGGAGCTGCTTAGTGTGATTGGCATCATTGCGTTTGCAGTCAG     50

BSNT_04992___     51 CGGCGCAATTGTTGCGATGGAAGAGGAATATGATATTTTAGGAGTTTATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33460___yv     51 CGGCGCAATTGTTGCGATGGAAGAGGAATATGATATTTTAGGAGTTTATA    100

BSNT_04992___    101 TATTAGGGATTGTCACCGCTTTTGGAGGAGGAGCGATCCGCAATTTGCTG    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU33460___yv    101 TATTAGGGATTGTCACAGCTTTTGGAGGAGGAGCGATCCGCAATTTGCTG    150

BSNT_04992___    151 ATCGGAGTTCCGGTGTCAGCGCTATGGGAGCAGGGAGCGTACTTTCAAAT    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU33460___yv    151 ATCGGTGTTCCGGTGTCAGCGCTATGGGAGCAGGGAGCGTACTTTCAAAT    200

BSNT_04992___    201 CGCGCTTTTATCTATTACAATTGTGTTTCTGTTTCCGAAGCTGCTGCTGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33460___yv    201 CGCGCTTTTATCTATTACAATTGTGTTTCTGTTTCCGAAGCTGCTGCTGA    250

BSNT_04992___    251 AGCATTGGAATAAGTGGGGCAATTTATCAGATGCGATCGGCCTCGCTGCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33460___yv    251 AGCATTGGAATAAGTGGGGCAATTTATCAGATGCGATCGGCCTCGCTGCC    300

BSNT_04992___    301 TTTGCTATCCAAGGCGCACTGTATGCTGTCAAAATGGGCCATCCGCTTAG    350
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU33460___yv    301 TTTGCTATCCAAGGCGCACTGTATGCCGTCAAAATGGGCCATCCGCTTAG    350

BSNT_04992___    351 TGCCGTGATCGTGGCTGCGGTGCTGACGGGAAGCGGGGGCGGAATCATCC    400
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU33460___yv    351 TGCCGTGATCGTGGCTGCGGTGCTGACGGGAAGCGGGGGCGGGATCATCC    400

BSNT_04992___    401 GCGACCTTCTTGCCGGGCGCAAACCGCTTGTGCTGAAGGCAGAAATTTAT    450
                     |||||||||||||||||||||||||||||||||||||.||.|||||.|||
BSU33460___yv    401 GCGACCTTCTTGCCGGGCGCAAACCGCTTGTGCTGAAAGCGGAAATCTAT    450

BSNT_04992___    451 GCAGTCTGGGCGGCTCTCGGCGGTTTAATCGTCGGCTTGGGCTGGCTGGG    500
                     ||.||.||||||||.|||||||||||||||||||||||||||||||||||
BSU33460___yv    451 GCGGTATGGGCGGCGCTCGGCGGTTTAATCGTCGGCTTGGGCTGGCTGGG    500

BSNT_04992___    501 GAACTCGTTCGGCTTATACGTTCTGTTTTTCGTGCTCGTTGTTTGCCGGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33460___yv    501 GAACTCGTTCGGCTTATACGTTCTGTTTTTCGTGCTCGTTGTTTGCCGGG    550

BSNT_04992___    551 TTTGTTCCTATATGTTTAATTGGAAGCTGCCAAACCGTTCTTTTCGCTTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33460___yv    551 TTTGTTCCTATATGTTTAATTGGAAGCTGCCAAACCGTTCTTTTCGCTTA    600

BSNT_04992___    601 GATAGTCAGTAA    612
                     ||||   |.|||
BSU33460___yv    601 GATA---ATTAA    609


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