Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04989 and BSU33440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence dna-align/BSNT_04989___yvgR.1.22522.seq
# -bsequence dna-align/BSU33440___cysJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04989___yvgR-BSU33440___cysJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04989___yvgR-BSU33440___cysJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04989___yvgR
# 2: BSU33440___cysJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1818
# Identity: 1799/1818 (99.0%)
# Similarity: 1799/1818 (99.0%)
# Gaps: 0/1818 ( 0.0%)
# Score: 8919.0
#
#
#=======================================
BSNT_04989___ 1 TTGCAACTTCAGGTAATGAACAGTCCGTTTAATCAGGAGCAGGCAGAGCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1 TTGCAACTTCAGGTAATGAACAGTCCGTTTAATCAGGAGCAGGCAGAGCT 50
BSNT_04989___ 51 CCTTAACCGCCTTCTGCCGACCTTGACCGAATCCCAGAAAATCTGGCTGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 51 CCTTAACCGCCTTCTGCCGACCTTGACCGAATCCCAGAAAATCTGGCTGA 100
BSNT_04989___ 101 GCGGATATTTATCCGCTCAATCTGTTTCCGCCCAAGAAGCTGCGGGTGCG 150
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU33440___cy 101 GCGGATATTTATCCGCTCAATCTGTTTCCGCCCAAGAAGCTGCGGGTACG 150
BSNT_04989___ 151 CCGGCGGCAGCTGTGTCTGCGGAAGCACCGGCACCGGCCGTTTCAAAAGA 200
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU33440___cy 151 CCGGCGGCAGCTGTGTCAGCGGAAGCACCGGCACCGGCCGTTTCAAAAGA 200
BSNT_04989___ 201 AGTGACCGTTCTTTATGGTTCACAGACGGGAAACGCACAGGGGCTTGCAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 201 AGTGACCGTTCTTTATGGTTCACAGACGGGAAACGCACAGGGGCTTGCAG 250
BSNT_04989___ 251 AAAATGCCGGCAAGCAGCTTGAACAGAGCGGTTTTCAAGTGACCGTCTCA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 251 AAAATGCCGGCAAGCAGCTTGAACAGAGCGGTTTTCAAGTGACCGTCTCA 300
BSNT_04989___ 301 TCCATGAGCGATTTTAAGCCGAATCAGCTGAAGAAGGTAACCAATCTTTT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 301 TCCATGAGCGATTTTAAGCCGAATCAGCTGAAGAAGGTAACCAATCTTTT 350
BSNT_04989___ 351 AATCGTCGTCAGTACTCATGGAGAAGGCGAGCCGCCTGATAACGCGCTGT 400
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU33440___cy 351 AATCGTCGTCAGTACGCATGGAGAAGGCGAGCCGCCTGATAACGCGCTGT 400
BSNT_04989___ 401 CGTTTCACGAATTTCTGCACGGAAGACGGGCGCCTAAGCTTGAAGATCTG 450
|||||||.||||||||||||||||||||||||||||||||||||||.|||
BSU33440___cy 401 CGTTTCATGAATTTCTGCACGGAAGACGGGCGCCTAAGCTTGAAGACCTG 450
BSNT_04989___ 451 CGTTTTTCCGTTTTGGCGCTTGGTGACAGTTCGTACGAATTTTTCTGCCA 500
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 451 CGCTTTTCCGTTTTGGCGCTTGGTGACAGTTCGTACGAATTTTTCTGCCA 500
BSNT_04989___ 501 GACAGGGAAAGAATTTGATCAGCGCTTAGAAGAACTCGGCGGAAAACGGA 550
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU33440___cy 501 GACAGGGAAAGAATTTGATCAACGCTTAGAAGAACTCGGCGGAAAACGGA 550
BSNT_04989___ 551 TTTCTCCGCGCGTTGATTGCGATCTTGACTATGATGAACCGGCAGCCGAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 551 TTTCTCCGCGCGTTGATTGCGATCTTGACTATGATGAACCGGCAGCCGAA 600
BSNT_04989___ 601 TGGCTTGAGGGTGTATTGAAGGGATTAAATGAAGCTGGGGGCGGAAGCGC 650
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU33440___cy 601 TGGCTTGAGGGTGTATTGAAAGGATTAAATGAAGCTGGGGGCGGAAGCGC 650
BSNT_04989___ 651 CGCGCCTGCGCCGCCGGCTGCGTCTCAAACCGGTGAGTCTTCGTATTCCA 700
|||||||||||||.||||||||||.|||||||||||||||||||||||||
BSU33440___cy 651 CGCGCCTGCGCCGGCGGCTGCGTCACAAACCGGTGAGTCTTCGTATTCCA 700
BSNT_04989___ 701 GAACAAACCCGTTTCGGGCTGAAGTGTTAGAAAATTTAAATTTAAACGGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 701 GAACAAACCCGTTTCGGGCTGAAGTGTTAGAAAATTTAAATTTAAACGGC 750
BSNT_04989___ 751 AGAGGATCAAATAAAGAAACACGCCATGTGGAGCTGTCTCTTGAAGGATC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 751 AGAGGATCAAATAAAGAAACACGCCATGTGGAGCTGTCTCTTGAAGGATC 800
BSNT_04989___ 801 AGGCCTGACTTACGAGCCTGGTGACAGCCTCGGCGTCTATCCAGAAAACG 850
.|||||||||||||||||||||||||||||||||||||||||.|||||||
BSU33440___cy 801 TGGCCTGACTTACGAGCCTGGTGACAGCCTCGGCGTCTATCCGGAAAACG 850
BSNT_04989___ 851 ATCCGGAACTTGTCGAGCTGCTCCTTAAGGAAATGAATTGGGACCCGGAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 851 ATCCGGAACTTGTCGAGCTGCTCCTTAAGGAAATGAATTGGGACCCGGAA 900
BSNT_04989___ 901 GAAATTGTGACGCTTAATAAGCAAGGTGATGTCCGTCCGCTGAAAGAAGC 950
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU33440___cy 901 GAAATTGTGACGCTTAATAAGCAAGGTGATGTCCGACCGCTGAAAGAAGC 950
BSNT_04989___ 951 GCTGATTTCTCACTATGAGATTACCGTTCTCACAAAACCGCTTCTTGAAC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 951 GCTGATTTCTCACTATGAGATTACCGTTCTCACAAAACCGCTTCTTGAAC 1000
BSNT_04989___ 1001 AGGCAGCCCAGCTGACAGGGAACGATGAGCTTAGAGAGCTTTTAGCCCCG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1001 AGGCAGCCCAGCTGACAGGGAACGATGAGCTTAGAGAGCTTTTAGCCCCG 1050
BSNT_04989___ 1051 GGAAATGAGGAGAATGTAAAAGCCTATATTGAAGGGCGCGATTTGCTTGA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1051 GGAAATGAGGAGAATGTAAAAGCCTATATTGAAGGGCGCGATTTGCTTGA 1100
BSNT_04989___ 1101 TCTCGTCCGTGACTATGGCCCATTTAGTGTATCTGCGCAGGAGTTTGTCT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1101 TCTCGTCCGTGACTATGGCCCATTTAGTGTATCTGCGCAGGAGTTTGTCT 1150
BSNT_04989___ 1151 CGATTTTGCGAAAAATGCCTGCCCGCCTTTATTCGATTGCAAGCAGTTTA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1151 CGATTTTGCGAAAAATGCCTGCCCGCCTTTATTCGATTGCAAGCAGTTTA 1200
BSNT_04989___ 1201 TCCGCAAATCCGGATGAAGTGCATTTAACAATCGGCGCAGTCCGCTACGA 1250
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU33440___cy 1201 TCCGCAAATCCGGATGAAGTGCACTTAACAATCGGCGCAGTCCGCTACGA 1250
BSNT_04989___ 1251 TGCGCATGGCCGTGAACGAAAAGGCGTCTGCTCGATTTTGTGCGCGGAAC 1300
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1251 TGCGCACGGCCGTGAACGAAAAGGCGTCTGCTCGATTTTGTGCGCGGAAC 1300
BSNT_04989___ 1301 GTCTGCAGCCGGGAGACACACTGCCGGTTTATGTACAGCACAATCAAAAC 1350
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1301 GACTGCAGCCGGGAGACACACTGCCGGTTTATGTACAGCACAATCAAAAC 1350
BSNT_04989___ 1351 TTTAAGCTTCCGAAAGACCCTGAAACACCGATTATCATGGTGGGCCCTGG 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1351 TTTAAGCTTCCGAAAGACCCTGAAACACCGATTATCATGGTGGGCCCTGG 1400
BSNT_04989___ 1401 GACAGGCGTCGCACCTTTCCGTTCCTTTATGCAGGAGCGTGAGGAGACGG 1450
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU33440___cy 1401 GACAGGCGTCGCACCTTTCCGTTCGTTTATGCAGGAGCGTGAGGAGACGG 1450
BSNT_04989___ 1451 GAGCGGAAGGAAAGGCATGGATGTTCTTTGGCGATCAGCGCTTTGTCACG 1500
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU33440___cy 1451 GAGCGGAAGGAAAGGCATGGATGTTCTTTGGCGATCAGCACTTTGTCACG 1500
BSNT_04989___ 1501 GATTTCCTTTACCAGACAGAGTGGCAGAATTGGCTCAAAGACGGTGTGCT 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1501 GATTTCCTTTACCAGACAGAGTGGCAGAATTGGCTCAAAGACGGTGTGCT 1550
BSNT_04989___ 1551 GACAAAAATGGATGTGGCGTTCTCACGTGATACAGAAGAAAAAGTATATG 1600
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU33440___cy 1551 GACAAAAATGGATGTGGCGTTCTCACGTGATACGGAAGAAAAAGTATATG 1600
BSNT_04989___ 1601 TGCAGCACCGCATGCTTGAACATAGCGCAGAATTGTTTGAATGGCTTCAA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1601 TGCAGCACCGCATGCTTGAACATAGCGCAGAATTGTTTGAATGGCTTCAA 1650
BSNT_04989___ 1651 GAAGGAGCGGCTGTTTACATTTGCGGAGATGAAAAGCACATGGCGCATGA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1651 GAAGGAGCGGCTGTTTACATTTGCGGAGATGAAAAGCACATGGCGCATGA 1700
BSNT_04989___ 1701 CGTCCATAACACATTGCTTGAAATTATCGAAAAAGAAGGCAATATGAGCC 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1701 CGTCCATAACACATTGCTTGAAATTATCGAAAAAGAAGGCAATATGAGCC 1750
BSNT_04989___ 1751 GCGAAGAGGCGGAGGCTTATCTTGCCGATATGCAGCAGCAAAAACGCTAT 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33440___cy 1751 GCGAAGAGGCGGAGGCTTATCTTGCCGATATGCAGCAGCAAAAACGCTAT 1800
BSNT_04989___ 1801 CAGCGTGATGTATATTGA 1818
||||||||||||||||||
BSU33440___cy 1801 CAGCGTGATGTATATTGA 1818
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