Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04951 and BSU33222
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_04951.1.22522.seq
# -bsequence dna-align/BSU33222___rsoA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04951-BSU33222___rsoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04951-BSU33222___rsoA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04951
# 2: BSU33222___rsoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 156/240 (65.0%)
# Similarity: 156/240 (65.0%)
# Gaps: 81/240 (33.8%)
# Score: 768.0
#
#
#=======================================
BSNT_04951 0 -------------------------------------------------- 0
BSU33222___rs 1 GTGGACGGCCAGTTTGAACAAAAAAAGAAACAAAAAGACGAGACTTATGA 50
BSNT_04951 1 -------------------------------ATGATCAGAAAAAAACTCA 19
|||||||||||||||||||
BSU33222___rs 51 CATTGAGCACCTGATTGCATGCTTTTCACCGATGATCAGAAAAAAACTCA 100
BSNT_04951 20 GCAATACGTCCTATCAAGAAAGAGAAGATTTAGAGCAAGAGCTGAAGATC 69
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33222___rs 101 GCAATACGTCCTATCAAGAAAGAGAAGATTTAGAGCAAGAGCTGAAGATC 150
BSNT_04951 70 AAAATGTTTGAAAAGGCTGATATGCTTTTGTGTCAGGATGTCCCGGGATT 119
|||||||||||||||||||||||||||||.|||||||||||.|||||.||
BSU33222___rs 151 AAAATGTTTGAAAAGGCTGATATGCTTTTATGTCAGGATGTACCGGGGTT 200
BSNT_04951 120 TTGGGAGTTTATTTTGTACATGGTAGATGAGAACTCATAA 159
||||||||||||||||||||||||||||||||||||||||
BSU33222___rs 201 TTGGGAGTTTATTTTGTACATGGTAGATGAGAACTCATAA 240
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