Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04946 and BSU33200

See Amino acid alignment / Visit BSNT_04946 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence dna-align/BSNT_04946___yvrE.1.22522.seq
#    -bsequence dna-align/BSU33200___yvrE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04946___yvrE-BSU33200___yvrE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04946___yvrE-BSU33200___yvrE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04946___yvrE
# 2: BSU33200___yvrE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 879
# Identity:     875/879 (99.5%)
# Similarity:   875/879 (99.5%)
# Gaps:           0/879 ( 0.0%)
# Score: 4359.0
# 
#
#=======================================

BSNT_04946___      1 ATGGATGCAGTATTGGAAGCAGACACTCGGGCAGTGATTGGAGAAGGCCC     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU33200___yv      1 ATGGATGCAGTATTGGAAGCAGACACTCGGGCAGTGATTGGTGAAGGCCC     50

BSNT_04946___     51 GTTATGGGATGAAGAAAACGGCCGCTTATATTGGGTTGATATCCTGGGGA    100
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU33200___yv     51 GTTATGGGATGAAGAGAACGGCCGCTTATATTGGGTTGATATCCTGGGGA    100

BSNT_04946___    101 GCGAGCTCCATATCTTTGACCCTGAAGAAAAAATCAACCGATCAATCAAA    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU33200___yv    101 GCGAGCTCCACATCTTTGACCCTGAAGAAAAAATCAACCGATCAATCAAA    150

BSNT_04946___    151 TTCAAATCCTTTGTGACGGCGCTTGCGAAATATTCAAAGGATGAACTGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    151 TTCAAATCCTTTGTGACGGCGCTTGCGAAATATTCAAAGGATGAACTGAT    200

BSNT_04946___    201 TATGACGATGAAGGACGGGTTTTACCTGTATCATCTTCGGGATGACAGCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    201 TATGACGATGAAGGACGGGTTTTACCTGTATCATCTTCGGGATGACAGCT    250

BSNT_04946___    251 TGGAAAAAATTAAACAGCCGAAGGACATGCATGAGAGCCTGAGATTTAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    251 TGGAAAAAATTAAACAGCCGAAGGACATGCATGAGAGCCTGAGATTTAAT    300

BSNT_04946___    301 GATGCTAAATGTGACCCGTACGGAAGGCTTTGGGCGGGGACGACGAGCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    301 GATGCTAAATGTGACCCGTACGGAAGGCTTTGGGCGGGGACGACGAGCAT    350

BSNT_04946___    351 GGAAGGCGAGCAAAAACAGGCGTCGCTGTACCGTTTGAATCTAGACGGCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    351 GGAAGGCGAGCAAAAACAGGCGTCGCTGTACCGTTTGAATCTAGACGGCA    400

BSNT_04946___    401 GTCTTGTCAAAATCAAGGATCAAGTCTCCACCTCAAACGGTTTGGATTGG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    401 GTCTTGTCAAAATCAAGGATCAAGTCTCCACCTCAAACGGTTTGGATTGG    450

BSNT_04946___    451 GACCGCGAGCGGAATTTGATGTATTACATCGACACGCCGACCCAGGAGAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    451 GACCGCGAGCGGAATTTGATGTATTACATCGACACGCCGACCCAGGAGAT    500

BSNT_04946___    501 TGTACGTTACAGCTATGATCCTCAAAGCGGGGATGTTTCGAATCCAGAAC    550
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU33200___yv    501 TGTACGTTACAGCTATGATCCTCAAAGCGGAGATGTTTCGAATCCAGAAC    550

BSNT_04946___    551 CTGTCTATCGTTTTGATCAGTCAGACGGATTGCCGGACGGCATGACAATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    551 CTGTCTATCGTTTTGATCAGTCAGACGGATTGCCGGACGGCATGACAATT    600

BSNT_04946___    601 GACCAAAATGGCATGCTGTGGGTGGCGCTGTTTGGCGGCAGCCGCGTTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    601 GACCAAAATGGCATGCTGTGGGTGGCGCTGTTTGGCGGCAGCCGCGTTGT    650

BSNT_04946___    651 TCACATTGACCCGTTTCAGAAAAAAGAAATCAATTCAATCAGCGTGCCGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    651 TCACATTGACCCGTTTCAGAAAAAAGAAATCAATTCAATCAGCGTGCCGG    700

BSNT_04946___    701 CTAAATATGTCACGTGCTGCGCGTTCGGCGGCAGAGACTTAAAAACCCTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    701 CTAAATATGTCACGTGCTGCGCGTTCGGCGGCAGAGACTTAAAAACCCTT    750

BSNT_04946___    751 TACATTACAACGGCAACAGAACAAATGACAGAAAAAGAGAGATACGAGCA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    751 TACATTACAACGGCAACAGAACAAATGACAGAAAAAGAGAGATACGAGCA    800

BSNT_04946___    801 GCCTCACGCTGGAGGGTTGTTTTCAGCACAACTGGAAACAGGCGGATATC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33200___yv    801 GCCTCACGCTGGAGGGTTGTTTTCAGCACAACTGGAAACAGGCGGATATC    850

BSNT_04946___    851 AGCCGGTACCATTTGCTGGAGACGTATAA    879
                     |||||||||||||||||||||||||||||
BSU33200___yv    851 AGCCGGTACCATTTGCTGGAGACGTATAA    879


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