Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04940 and BSU33180

See Amino acid alignment / Visit BSNT_04940 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence dna-align/BSNT_04940___yvrC.1.22522.seq
#    -bsequence dna-align/BSU33180___yvrC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04940___yvrC-BSU33180___yvrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04940___yvrC-BSU33180___yvrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04940___yvrC
# 2: BSU33180___yvrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 945
# Identity:     937/945 (99.2%)
# Similarity:   937/945 (99.2%)
# Gaps:           0/945 ( 0.0%)
# Score: 4653.0
# 
#
#=======================================

BSNT_04940___      1 ATGAAAAAACGAGCCGGGATATGGACTGCGCTCCTGTTGGCTGTTGTTAT     50
                     ||||||||||||||||||||||||.|||||||.||||||||||.||||||
BSU33180___yv      1 ATGAAAAAACGAGCCGGGATATGGGCTGCGCTTCTGTTGGCTGCTGTTAT     50

BSNT_04940___     51 GCTGGCAGGCTGCGGCAATCCTGCGGATCAGAAGGATTCAAAGGCAAAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv     51 GCTGGCAGGCTGCGGCAATCCTGCGGATCAGAAGGATTCAAAGGCAAAAC    100

BSNT_04940___    101 AAAAAACAGAAGTGTTCCCTGTCACCATTGATGATGCGTCGAACCAAGAT    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU33180___yv    101 AAAAAACAGAAGTGTTCCCTGTCACCATTGATGATGCGTCAAACCAAGAT    150

BSNT_04940___    151 GTAACCATCAAAAAAGAGCCAAAAAAGATTGTTTCATTAATGCCGAGCAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    151 GTAACCATCAAAAAAGAGCCAAAAAAGATTGTTTCATTAATGCCGAGCAA    200

BSNT_04940___    201 CACAGAAATTACATACGCACTCGGCCTTGGTGACAAAGTGGTCGGTGTCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    201 CACAGAAATTACATACGCACTCGGCCTTGGTGACAAAGTGGTCGGTGTCA    250

BSNT_04940___    251 CCACAAACGATACCTATCCAAAGGAAGTCAAAAAGGTTGAGAAAGTCGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    251 CCACAAACGATACCTATCCAAAGGAAGTCAAAAAGGTTGAGAAAGTCGGA    300

BSNT_04940___    301 GATATGAATGTAAACGTTGAAAAAGTCATTTCTCTAAAACCAGATCTCGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    301 GATATGAATGTAAACGTTGAAAAAGTCATTTCTCTAAAACCAGATCTCGT    350

BSNT_04940___    351 TCTGGCCCATGAGTCTTCCATGTCAGCATCAGCGGATGCCATCAAACAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    351 TCTGGCCCATGAGTCTTCCATGTCAGCATCAGCGGATGCCATCAAACAGC    400

BSNT_04940___    401 TGAAAGACGCGGGCATTACAGTGCTGACTGTCAATGATGCACAATCATTC    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    401 TGAAGGACGCGGGCATTACAGTGCTGACTGTCAATGATGCACAATCATTC    450

BSNT_04940___    451 TCCGAGGTGTACAAATCAATCGAAATGATCGGAGAAGCTGGCGGGGCGGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    451 TCCGAGGTGTACAAATCAATCGAAATGATCGGAGAAGCTGGCGGGGCGGA    500

BSNT_04940___    501 GAAAAAAGCCGATCAGCTCGTGAAAAGTATGAAATCAGATCTAAAGGATA    550
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU33180___yv    501 GAAAAAAGCCGATCAGCTCGTGAAAAGCATGAAATCAGATCTAAAGGATA    550

BSNT_04940___    551 TTCAAGAAAAAGCGAAAACCATTTCAAAAGACGAGGAGAAAAGCGTATTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    551 TTCAAGAAAAAGCGAAAACCATTTCAAAAGACGAGGAGAAAAGCGTATTT    600

BSNT_04940___    601 ATCGAGGTTTCTCCTGATCCTGACATTTATACAACCGGAAAAGATACGTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    601 ATCGAGGTTTCTCCTGATCCTGACATTTATACAACCGGAAAAGATACGTT    650

BSNT_04940___    651 TATGAATGAAATGCTGAATGTCATCCATGCTAAAAACGCAGCTGCGGATC    700
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU33180___yv    651 TATGAATGAAATGCTAAATGTCATCCATGCTAAAAACGCAGCTGCGGATC    700

BSNT_04940___    701 AGACAGGATGGGTGCAAATGACAGACGAGGCGATCGTAAAACTCAATCCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    701 AGACAGGATGGGTGCAAATGACAGACGAGGCGATCGTAAAACTCAATCCT    750

BSNT_04940___    751 GATGCAATTGTTACAACGGACGGTGTGAAAGCGAAAGCTGTGGAAAAACG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    751 GATGCAATTGTTACAACGGACGGTGTGAAAGCGAAAGCTGTGGAAAAACG    800

BSNT_04940___    801 CGATGGCTGGAGCGAAATCAATGCTGTGAAACATCATCGTGTATATGATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    801 CGATGGCTGGAGCGAAATCAATGCTGTGAAACATCATCGTGTATATGATG    850

BSNT_04940___    851 TGGACCCTGATCTTGTGACACGTTCCGGTCCCCGTCTGATCGAAGGGGTC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33180___yv    851 TGGACCCTGATCTTGTGACACGTTCCGGTCCCCGTCTGATCGAAGGGGTC    900

BSNT_04940___    901 GAAGAACTTGCGGAAAGCATTTACCCGGATACGTTTAAAGAATAA    945
                     ||||||||||||||||||||||||||||||||||||||.||||||
BSU33180___yv    901 GAAGAACTTGCGGAAAGCATTTACCCGGATACGTTTAAGGAATAA    945


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04940 and BSU33180

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
