Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04939 and BSU33170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:27
# Commandline: needle
# -asequence dna-align/BSNT_04939___yvrB.1.22522.seq
# -bsequence dna-align/BSU33170___yvrB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04939___yvrB-BSU33170___yvrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04939___yvrB-BSU33170___yvrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04939___yvrB
# 2: BSU33170___yvrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1062
# Identity: 973/1062 (91.6%)
# Similarity: 973/1062 (91.6%)
# Gaps: 78/1062 ( 7.3%)
# Score: 4821.0
#
#
#=======================================
BSNT_04939___ 0 -------------------------------------------------- 0
BSU33170___yv 1 TTGCGGAAAGCATTTACCCGGATACGTTTAAGGAATAATCGTTATGCCGC 50
BSNT_04939___ 1 ----------------------------GTGAGCGTCATCTTAGGAATTT 22
||||||.|||||||||||||||
BSU33170___yv 51 ATATATCATTGGTTTCTCATTTTTAGCCGTGAGCATCATCTTAGGAATTT 100
BSNT_04939___ 23 CTTGCGGCAGCCTGCATATTCCTATTCCCGCTGTTTTTCGTGTCTTTTGG 72
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 101 CTTGCGGCAGCCTGCATATTCCTATTCCCGCTGTTTTTCGTGTCTTTTGG 150
BSNT_04939___ 73 CATCAAGGTTTCGGCGGCTCTATCGGTTCTGATGATCCGATGTACACTAA 122
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 151 CATCAAGGTTTCGGCGGCTCTATCGGTTCTGATGATCCGATGTACACTAA 200
BSNT_04939___ 123 TATTATGATGAATATCAGACTGCCGAGAGTTGTGCTGGCCGCCCTTGTGG 172
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 201 TATTATGATGAATATCAGACTGCCGAGAGTTGTGCTGGCCGCCCTTGTGG 250
BSNT_04939___ 173 GGGCGGCTCTTTCTATTGCAGGGGCCGCTTTTCAAGGATTGTTGAAAAAT 222
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 251 GGGCGGCTCTTTCTATTGCAGGGGCCGCTTTTCAAGGATTGTTGAAAAAT 300
BSNT_04939___ 223 CCGCTTGCTGATCCCTATACGCTAGGTGTGTCATCCGGTGCTTCAGTCGG 272
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 301 CCGCTTGCTGATCCCTATACGCTAGGTGTGTCATCCGGTGCTTCAGTCGG 350
BSNT_04939___ 273 AGCTGTTGTGACTCTGTTCTTAGGTCTGCACCTTCCTGTCATCGGAGGGT 322
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU33170___yv 351 AGCTGTTGTGACTCTGTTCTTAGGTTTGCACCTTCCTGTCATCGGAGGGT 400
BSNT_04939___ 323 TTACACTCCCGGTTGTGAGTGTAGCCGCGGCACTTGCCACGATGGCGGCG 372
||||||||||||||.|||||||||||||||||||.|||||||||||||||
BSU33170___yv 401 TTACACTCCCGGTTTTGAGTGTAGCCGCGGCACTGGCCACGATGGCGGCG 450
BSNT_04939___ 373 GTCCTTTTCTTCAGCCGCCTCGTTCATGCTTCGATGTCTGTTTCCACCCT 422
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 451 GTCCTTTTCTTCAGCCGCCTCGTTCATGCTTCGATGTCTGTTTCCACCCT 500
BSNT_04939___ 423 CATTTTGACCGGTGTCATCACCAACTCTTTTTTGGGCGCATTTATTTCTC 472
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU33170___yv 501 CATTTTGACCGGTGTCATCACCAACTCTTTTTTAGGCGCATTTATTTCTC 550
BSNT_04939___ 473 TTATCATCGCCTTGACAGGAGACAACCTGCTTCCGATTGTGCATTGGCTG 522
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 551 TTATCATCGCCTTGACAGGAGACAACCTGCTTCCGATTGTGCATTGGCTG 600
BSNT_04939___ 523 CTTGGCAGCGTCTCAATGAGGGGCTGGAGCTATGTTATTTTGTTTCTCCC 572
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 601 CTTGGCAGCGTCTCAATGAGGGGCTGGAGCTATGTTATTTTGTTTCTCCC 650
BSNT_04939___ 573 GTTTTTTCTTTTGGGAACCATTTTATTGATTATAAACGGAAGGGAACTGA 622
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 651 GTTTTTTCTTTTGGGAACCATTTTATTGATTATAAACGGAAGGGAACTGA 700
BSNT_04939___ 623 ACGTGATGACATATGGAGAAGATAAAGCAAAGCTTCTTGGAGTCAGTGTT 672
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU33170___yv 701 ACGTGATGACATATGGAGAAGATAAAGCAAAGCTTCTTGGAGTCAGCGTT 750
BSNT_04939___ 673 CAGCAGAGGAAGATGCTGATTTTAATAGCCGGATCTCTTTTGACGGGAAG 722
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU33170___yv 751 CAGCAGAGGAAGATGATGATTTTAATAGCCGGATCTCTTTTGACGGGAAG 800
BSNT_04939___ 723 CGCTGTGGCAGTATCGGGTACGATTGGCTTTGTCGGCCTTGTGATTCCGC 772
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 801 CGCTGTGGCAGTATCGGGTACGATTGGCTTTGTCGGCCTTGTGATTCCGC 850
BSNT_04939___ 773 ATATCACAAGGCTTTTGTGGGGAACGGACCATCGGCATTTACTGCCGCTG 822
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU33170___yv 851 ATATCACAAGGCTTTTGTGGGGAACGGACCATCGGCATTTACTGCCGTTG 900
BSNT_04939___ 823 TCCGCCTTGCTCGGGGCAGGGTTTCTCGTTTTAGCCGATCTGCTTTCCAG 872
|||||||||||.||||||||||||||.|||||||||||||||||||||||
BSU33170___yv 901 TCCGCCTTGCTTGGGGCAGGGTTTCTTGTTTTAGCCGATCTGCTTTCCAG 950
BSNT_04939___ 873 AACCATCATTGAGCCGATTGAACTGCCGATCGGGATCATTACGTCCTTGG 922
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33170___yv 951 AACCATCATTGAGCCGATTGAACTGCCGATCGGGATCATTACGTCCTTGG 1000
BSNT_04939___ 923 CGGGAGCGCCTGTGTTCGCTCTTATTTTAATTCGGCAGCACCGCGGGGGG 972
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU33170___yv 1001 CGGGAGCGCCTGTGTTCGCTCTTATTTTAATTCGGCAGCATCGCGGGGGG 1050
BSNT_04939___ 973 AGAAGCTTATGA 984
||||||||||||
BSU33170___yv 1051 AGAAGCTTATGA 1062
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