Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04938 and BSU33160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence dna-align/BSNT_04938___yvrA.1.22522.seq
# -bsequence dna-align/BSU33160___yvrA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04938___yvrA-BSU33160___yvrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04938___yvrA-BSU33160___yvrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04938___yvrA
# 2: BSU33160___yvrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1332
# Identity: 1309/1332 (98.3%)
# Similarity: 1309/1332 (98.3%)
# Gaps: 3/1332 ( 0.2%)
# Score: 6465.0
#
#
#=======================================
BSNT_04938___ 1 ATGATGAAGGCAGAAGGGCTGTCGGGAGGATACGGCGACAGCCGCCTAAT 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 1 ---ATGAAGGCAGAAGGGCTGTCGGGAGGATACGGCGACAGCCGCCTAAT 47
BSNT_04938___ 51 TAACAATGTCAGCTTAACCGTGGAGAAGGGAGAATTTCTCGGAATTCTCG 100
.|||||||||||||||||.||||||||||||||||||||.||||||||||
BSU33160___yv 48 CAACAATGTCAGCTTAACAGTGGAGAAGGGAGAATTTCTTGGAATTCTCG 97
BSNT_04938___ 101 GCCCTAATGGAAGCGGAAAAACCACGCTTTTGCACTTGCTGACAGGTACG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 98 GCCCTAATGGAAGCGGAAAAACCACGCTTTTGCACTTGCTGACAGGTACG 147
BSNT_04938___ 151 CTGCCGGCCAAGGAAGGCAGGGTTTATCTGGCTGGAAAACTGCTGGCGGA 200
||||||||||||.|||||||||||||||||||.|||||||||||||||||
BSU33160___yv 148 CTGCCGGCCAAGAAAGGCAGGGTTTATCTGGCCGGAAAACTGCTGGCGGA 197
BSNT_04938___ 201 CTATAAACCGAAGGAACTGGCGCAAATCATGGCTGTCCTGCCGCAAAAAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 198 CTATAAACCGAAGGAACTGGCGCAAATCATGGCTGTCCTGCCGCAAAAAA 247
BSNT_04938___ 251 CGGATCAAGCCTTCACCTTTACCGTCGAAGAAACTGTAGCCTTTGGCAGA 300
.|||||||||||||||||||||.|||||||||||||||||||||||||||
BSU33160___yv 248 TGGATCAAGCCTTCACCTTTACTGTCGAAGAAACTGTAGCCTTTGGCAGA 297
BSNT_04938___ 301 TATCCATTCCAAACGGGACTGTTCAGACAGCAGACTGAAAAGGATGAAGC 350
|||||||||||||||||.|||||||||||||||||||||||||.||||||
BSU33160___yv 298 TATCCATTCCAAACGGGGCTGTTCAGACAGCAGACTGAAAAGGGTGAAGC 347
BSNT_04938___ 351 CATTGTACAGGAAGCAATGGAGCAAACAGGAGTGGCCGATTTTGCGCAAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 348 CATTGTACAGGAAGCAATGGAGCAAACAGGAGTGGCCGATTTTGCGCAAA 397
BSNT_04938___ 401 AGCCGATTCGCGAACTAAGCGGAGGGGAACAGCAGCGGGTGTATTTGGCA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 398 AGCCGATTCGCGAACTAAGCGGAGGGGAACAGCAGCGGGTGTATTTGGCA 447
BSNT_04938___ 451 CAAGCTTTGGCACAGCAGCCGCGCATTTTATTTTTGGACGAGCCGACTAA 500
|||||||||||.|||||||||||.||||||||||||||||||||||||||
BSU33160___yv 448 CAAGCTTTGGCGCAGCAGCCGCGTATTTTATTTTTGGACGAGCCGACTAA 497
BSNT_04938___ 501 TTTTCTCGATCTGGCTTATCAAAAAGACCTGCTTGATCTGATCAAACGCC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 498 TTTTCTCGATCTGGCTTATCAAAAAGACCTGCTTGATCTGATCAAACGCC 547
BSNT_04938___ 551 TGACGAGAGAAAGCGGATTGGCGGCTGTCAGCGTTTTTCATGATCTGAAC 600
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU33160___yv 548 TGACGAGAGAAAGCGGATTGGCAGCTGTCAGCGTTTTTCATGATCTGAAC 597
BSNT_04938___ 601 ACCGCAAGCCTGTACTGTGATGAGCTCATGTTTATGAAAAACGGTACCGC 650
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU33160___yv 598 ACCGCAAGCCTGTACTGTGATGGGCTCATGTTTATGAAAAACGGTACCGC 647
BSNT_04938___ 651 CGGGCCTAAGCAAAAACCGGAATATGCTGTCACAGAACAAAGCATAAAGG 700
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU33160___yv 648 CGGGCCTAAGCAAAAACCGGAATATGCTGTTACAGAACAAAGCATAAAGG 697
BSNT_04938___ 701 CGGTGTACGATACAGATGTCACCGCCTTGGTACATCAAAGCTCACCTAAA 750
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU33160___yv 698 CGGTGTACGATACAGATGTCACCGCCTTGGTTCATCAAAGCTCACCTAAA 747
BSNT_04938___ 751 CCGATGATTGTGATTCAGCCTGAAAAAGATAGCGTGAAGCAGCAGTCTAT 800
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU33160___yv 748 CCGATGATTGTGATTCAGCCTGAAAAAGATAGCGTGAAGCGGCAGTCTAT 797
BSNT_04938___ 801 CCCATTTGAAGCATTGCTCCAAGCGGGGCGTGATGACATTCTTCTGCAAA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 798 CCCATTTGAAGCATTGCTCCAAGCGGGGCGTGATGACATTCTTCTGCAAA 847
BSNT_04938___ 851 CGGAAATCCCGCTTCGAACATTGTCCTCCACGCCTATCGGTGCAGGGTTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 848 CGGAAATCCCGCTTCGAACATTGTCCTCCACGCCTATCGGTGCAGGGTTT 897
BSNT_04938___ 901 TCGTGGAGCAGGACGCTGATCCATAAACGGCTGCCAGATCAGCCAGATCC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 898 TCGTGGAGCAGGACGCTGATCCATAAACGGCTGCCAGATCAGCCAGATCC 947
BSNT_04938___ 951 GATAGAAGGACTTACGGCCTGTCTTTCAGAAAGCGGTTTTCAACTGCAGG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 948 GATAGAAGGACTTACGGCCTGTCTTTCAGAAAGCGGTTTTCAACTGCAGG 997
BSNT_04938___ 1001 AGACGTGTGCGATGGCTTCTTCAGAAAGACTTGACCATTTCGTGTATCGA 1050
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU33160___yv 998 AGACGTGTGCGATGGCTTCTTCAGAAAGACTTGACCGTTTCGTGTATCGA 1047
BSNT_04938___ 1051 ACATATGAAGACGGAGAGTTATCCGTTTTCATATGCGTTCAGACCGGCTT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 1048 ACATATGAAGACGGAGAGTTATCCGTTTTCATATGCGTTCAGACCGGCTT 1097
BSNT_04938___ 1101 TTCGATTTGGATTTTGATTAACGGCTATGCGGCAGATCAATTCTTCATCA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 1098 TTCGATTTGGATTTTGATTAACGGCTATGCGGCAGATCAATTCTTCATCA 1147
BSNT_04938___ 1151 AGGCTCTTATGGCTGCCGAAGCAGAACGGACGAAAGTGCTGGGAGACGGA 1200
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 1148 AAGCTCTTATGGCTGCCGAAGCAGAACGGACGAAAGTGCTGGGAGACGGA 1197
BSNT_04938___ 1201 AGAGGCACAGGTGATATTCTCATCGCCGCGACTCAAACTCAGCAATCCGA 1250
.||||||||||||||||||||||||||||||||||||||||||||||.||
BSU33160___yv 1198 GGAGGCACAGGTGATATTCTCATCGCCGCGACTCAAACTCAGCAATCAGA 1247
BSNT_04938___ 1251 AAACATAGAACAGCGGCTGAACCAATTGATAAAGAAAGGGACAGCTGAAT 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33160___yv 1248 AAACATAGAACAGCGGCTGAACCAATTGATAAAGAAAGGGACAGCTGAAT 1297
BSNT_04938___ 1301 GTATAAAAGAGGCTGCTGAGTTGTTTGAATAA 1332
||||||||||||||||||||||||||||||||
BSU33160___yv 1298 GTATAAAAGAGGCTGCTGAGTTGTTTGAATAA 1329
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