Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04924 and BSU33080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence dna-align/BSNT_04924___yvqC.1.22522.seq
# -bsequence dna-align/BSU33080___liaR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04924___yvqC-BSU33080___liaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04924___yvqC-BSU33080___liaR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04924___yvqC
# 2: BSU33080___liaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity: 628/636 (98.7%)
# Similarity: 628/636 (98.7%)
# Gaps: 0/636 ( 0.0%)
# Score: 3108.0
#
#
#=======================================
BSNT_04924___ 1 GTGATTCGAGTATTATTGATTGATGATCATGAAATGGTCAGAATGGGGCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li 1 GTGATTCGAGTATTATTGATTGATGATCATGAAATGGTCAGAATGGGGCT 50
BSNT_04924___ 51 CGCGGCTTTTTTGGAGGCGCAGCCCGATATTGAAGTCATCGGCGAAGCAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li 51 CGCGGCTTTTTTGGAGGCGCAGCCCGATATTGAAGTCATCGGCGAAGCAT 100
BSNT_04924___ 101 CGGACGGCAGCGAAGGTGTTCGGCTTGCTGCGGAACTGTCGCCTGATGTC 150
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU33080___li 101 CGGACGGCAGCGAAGGTGTTCGGCTTGCTGTGGAACTGTCGCCTGATGTC 150
BSNT_04924___ 151 ATTTTAATGGACCTTGTCATGGAGGGCATGGATGGCATTCAAGCTACAAA 200
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU33080___li 151 ATTTTAATGGACCTTGTCATGGAGGGCATGGATGGCATTGAAGCTACAAA 200
BSNT_04924___ 201 GCAAATTTGCCGGGAGCTTTCTGACCCGAAAATTATTGTGCTCACTAGCT 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU33080___li 201 GCAAATTTGCCGGGAGCTTTCCGACCCGAAAATTATTGTGCTCACTAGCT 250
BSNT_04924___ 251 TCATTGATGATGACAAAGTGTACCCGGTTATTGAAGCTGGCGCGCTCAGC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li 251 TCATTGATGATGACAAAGTGTACCCGGTTATTGAAGCTGGCGCGCTCAGC 300
BSNT_04924___ 301 TATCTGTTGAAAACCTCAAAAGCGGCAGAAATCGCCGATGCCATCCGCGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li 301 TATCTGTTGAAAACCTCAAAAGCGGCAGAAATCGCCGATGCCATCCGCGC 350
BSNT_04924___ 351 CGCAAGCAAGGGAGAGCCGAAGCTGGAGTCAAAAGTGGCGGGAAAAGTAT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li 351 CGCAAGCAAGGGAGAGCCGAAGCTGGAGTCAAAAGTGGCGGGAAAAGTAT 400
BSNT_04924___ 401 TATCCAGGCTGCGCCACTCAGGTGAAAACGAGCTCCCTCATGAATCGCTT 450
||||||||||||||||||||||||||||||.||||||.||||||||||||
BSU33080___li 401 TATCCAGGCTGCGCCACTCAGGTGAAAACGCGCTCCCGCATGAATCGCTT 450
BSNT_04924___ 451 ACGAAACGGGAGCTCGAAATACTCTTCCTGATCGCAGAAGGAAAGACAAA 500
||.||||||||||||||||||||||.||||||||||||||||||||||||
BSU33080___li 451 ACAAAACGGGAGCTCGAAATACTCTGCCTGATCGCAGAAGGAAAGACAAA 500
BSNT_04924___ 501 CAAAGAAATAGGCGAGGAACTGTTTATTACGATTAAAACAGTCAAAACAC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li 501 CAAAGAAATAGGCGAGGAACTGTTTATTACGATTAAAACAGTCAAAACAC 550
BSNT_04924___ 551 ATATTACCAATATTTTATCAAAGCTGGATGTCAGTGACCGGACGCAGGCG 600
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU33080___li 551 ATATTACGAATATTTTATCAAAGCTGGATGTCAGTGACCGGACGCAGGCG 600
BSNT_04924___ 601 GCGGTGTACGCACACCGAAATCATCTCGTGAATTAG 636
||||||||||||||||||||||||||||||||||||
BSU33080___li 601 GCGGTGTACGCACACCGAAATCATCTCGTGAATTAG 636
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