Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04924 and BSU33080

See Amino acid alignment / Visit BSNT_04924 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence dna-align/BSNT_04924___yvqC.1.22522.seq
#    -bsequence dna-align/BSU33080___liaR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04924___yvqC-BSU33080___liaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04924___yvqC-BSU33080___liaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04924___yvqC
# 2: BSU33080___liaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity:     628/636 (98.7%)
# Similarity:   628/636 (98.7%)
# Gaps:           0/636 ( 0.0%)
# Score: 3108.0
# 
#
#=======================================

BSNT_04924___      1 GTGATTCGAGTATTATTGATTGATGATCATGAAATGGTCAGAATGGGGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li      1 GTGATTCGAGTATTATTGATTGATGATCATGAAATGGTCAGAATGGGGCT     50

BSNT_04924___     51 CGCGGCTTTTTTGGAGGCGCAGCCCGATATTGAAGTCATCGGCGAAGCAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li     51 CGCGGCTTTTTTGGAGGCGCAGCCCGATATTGAAGTCATCGGCGAAGCAT    100

BSNT_04924___    101 CGGACGGCAGCGAAGGTGTTCGGCTTGCTGCGGAACTGTCGCCTGATGTC    150
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU33080___li    101 CGGACGGCAGCGAAGGTGTTCGGCTTGCTGTGGAACTGTCGCCTGATGTC    150

BSNT_04924___    151 ATTTTAATGGACCTTGTCATGGAGGGCATGGATGGCATTCAAGCTACAAA    200
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU33080___li    151 ATTTTAATGGACCTTGTCATGGAGGGCATGGATGGCATTGAAGCTACAAA    200

BSNT_04924___    201 GCAAATTTGCCGGGAGCTTTCTGACCCGAAAATTATTGTGCTCACTAGCT    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU33080___li    201 GCAAATTTGCCGGGAGCTTTCCGACCCGAAAATTATTGTGCTCACTAGCT    250

BSNT_04924___    251 TCATTGATGATGACAAAGTGTACCCGGTTATTGAAGCTGGCGCGCTCAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li    251 TCATTGATGATGACAAAGTGTACCCGGTTATTGAAGCTGGCGCGCTCAGC    300

BSNT_04924___    301 TATCTGTTGAAAACCTCAAAAGCGGCAGAAATCGCCGATGCCATCCGCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li    301 TATCTGTTGAAAACCTCAAAAGCGGCAGAAATCGCCGATGCCATCCGCGC    350

BSNT_04924___    351 CGCAAGCAAGGGAGAGCCGAAGCTGGAGTCAAAAGTGGCGGGAAAAGTAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li    351 CGCAAGCAAGGGAGAGCCGAAGCTGGAGTCAAAAGTGGCGGGAAAAGTAT    400

BSNT_04924___    401 TATCCAGGCTGCGCCACTCAGGTGAAAACGAGCTCCCTCATGAATCGCTT    450
                     ||||||||||||||||||||||||||||||.||||||.||||||||||||
BSU33080___li    401 TATCCAGGCTGCGCCACTCAGGTGAAAACGCGCTCCCGCATGAATCGCTT    450

BSNT_04924___    451 ACGAAACGGGAGCTCGAAATACTCTTCCTGATCGCAGAAGGAAAGACAAA    500
                     ||.||||||||||||||||||||||.||||||||||||||||||||||||
BSU33080___li    451 ACAAAACGGGAGCTCGAAATACTCTGCCTGATCGCAGAAGGAAAGACAAA    500

BSNT_04924___    501 CAAAGAAATAGGCGAGGAACTGTTTATTACGATTAAAACAGTCAAAACAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33080___li    501 CAAAGAAATAGGCGAGGAACTGTTTATTACGATTAAAACAGTCAAAACAC    550

BSNT_04924___    551 ATATTACCAATATTTTATCAAAGCTGGATGTCAGTGACCGGACGCAGGCG    600
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU33080___li    551 ATATTACGAATATTTTATCAAAGCTGGATGTCAGTGACCGGACGCAGGCG    600

BSNT_04924___    601 GCGGTGTACGCACACCGAAATCATCTCGTGAATTAG    636
                     ||||||||||||||||||||||||||||||||||||
BSU33080___li    601 GCGGTGTACGCACACCGAAATCATCTCGTGAATTAG    636


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