Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04922 and BSU33060

See Amino acid alignment / Visit BSNT_04922 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence dna-align/BSNT_04922___gerAB.1.22522.seq
#    -bsequence dna-align/BSU33060___gerAB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04922___gerAB-BSU33060___gerAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04922___gerAB-BSU33060___gerAB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04922___gerAB
# 2: BSU33060___gerAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1098
# Identity:    1085/1098 (98.8%)
# Similarity:  1085/1098 (98.8%)
# Gaps:           0/1098 ( 0.0%)
# Score: 5373.0
# 
#
#=======================================

BSNT_04922___      1 ATGAGCCAAAAACAGACTCCACTGAAACTTAATACCTTTCAAGGTATTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge      1 ATGAGCCAAAAACAGACTCCACTGAAACTTAATACCTTTCAAGGTATTTC     50

BSNT_04922___     51 TATTGTTGCAAATACAATGCTTGGGGCCGGACTTTTAACATTGCCGCGAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge     51 TATTGTTGCAAATACAATGCTTGGGGCCGGACTTTTAACATTGCCGCGAG    100

BSNT_04922___    101 CGCTGACCACTAAGGCTAATACGCCTGACGGCTGGATCACGCTGATATTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    101 CGCTGACCACTAAGGCTAATACGCCTGACGGCTGGATCACGCTGATATTA    150

BSNT_04922___    151 GAAGGTTTCATTTTTATTTTCTTCATTTATTTAAACACGCTCATTCAGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    151 GAAGGTTTCATTTTTATTTTCTTCATTTATTTAAACACGCTCATTCAGAA    200

BSNT_04922___    201 AAAACATCAATACCCTTCACTCTTTGAATATTTGAAGGAAGGGCTTGGGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    201 AAAACATCAATACCCTTCACTCTTTGAATATTTGAAGGAAGGGCTTGGGA    250

BSNT_04922___    251 AATGGATCGGCAGCATCATCGGCCTTTTGATCTGCGGCTATTTCCTCGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    251 AATGGATCGGCAGCATCATCGGCCTTTTGATCTGCGGCTATTTCCTCGGC    300

BSNT_04922___    301 GTAGCCAGCTTCGAGACACGGGCAATGGCTGAAATGGTGAAGTTTTTCCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    301 GTAGCCAGCTTCGAGACACGGGCAATGGCTGAAATGGTGAAGTTTTTCCT    350

BSNT_04922___    351 GCTGGAGAGAACCCCAATTCAAGTCATCATTTTAACGTTTATTTGCTGCG    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU33060___ge    351 GCTGGAGAGAACCCCAATTCAAGTCATTATTTTAACGTTTATTTGCTGCG    400

BSNT_04922___    401 GTATTTATTTAATCGTTGGGGGCTTAAGTGATGTGTCGCGGCTGTTTCCC    450
                     |.|||||||||||.||||||||||||||.|||||||||||||||||||||
BSU33060___ge    401 GCATTTATTTAATGGTTGGGGGCTTAAGCGATGTGTCGCGGCTGTTTCCC    450

BSNT_04922___    451 TTTTATTTAACGGTAACCATTATTATTTTGCTGATTGTGTTCGGGATCAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    451 TTTTATTTAACGGTAACCATTATTATTTTGCTGATTGTGTTCGGGATCAG    500

BSNT_04922___    501 TTTTAAAATTTTTGATATCAATAATTTGCGTCCTGTTTTAGGCGAAGGCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    501 TTTTAAAATTTTTGATATCAATAATTTGCGTCCTGTTTTAGGCGAAGGCC    550

BSNT_04922___    551 TTGGACCCATTGCAAACTCCCTTACCGTCGTTTCCATCTCTTTTTTAGGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    551 TTGGACCCATTGCAAACTCCCTTACCGTCGTTTCCATCTCTTTTTTAGGA    600

BSNT_04922___    601 ATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    601 ATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACAC    650

BSNT_04922___    651 GTTCAGATATGCGTCTCTAGGATTTTTAATTCCGATTATTTTATATATCC    700
                     |||||||||||||||||||||||||.|.|||||||||||.||||||||||
BSU33060___ge    651 GTTCAGATATGCGTCTCTAGGATTTCTGATTCCGATTATCTTATATATCC    700

BSNT_04922___    701 TTACGTATATTATCGTTGTCGGAGCTTTGACCGCTCCCGAGGTAAAAACG    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU33060___ge    701 TTACGTATATTATCGTTGTCGGAGCTTTGACCGCTCCCGAGGTGAAAACG    750

BSNT_04922___    751 CTGATTTGGCCGACTATTTCTCTCTTTCAGTCCTTTGAGCTTAAAGGCAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    751 CTGATTTGGCCGACTATTTCTCTCTTTCAGTCCTTTGAGCTTAAAGGCAT    800

BSNT_04922___    801 ATTTATTGAACGGTTTGAATCGTTTTTACTGGTGGTCTGGATCATCCAGT    850
                     |||||||||||||||||||||.||||||||||||||||||||.|||||||
BSU33060___ge    801 ATTTATTGAACGGTTTGAATCCTTTTTACTGGTGGTCTGGATTATCCAGT    850

BSNT_04922___    851 TTTTCACCACATTTGTCATTTACGGATACTTTGCCGCTAACGGGCTAAAG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    851 TTTTCACCACATTTGTCATTTACGGATACTTTGCCGCTAACGGGCTAAAG    900

BSNT_04922___    901 AAGACATTTGGATTATCGACTAAAACAAGCATGGTGATTATCGGTATAGC    950
                     ||||||||||||||||||||||||||||||||||||||||||||.|||.|
BSU33060___ge    901 AAGACATTTGGATTATCGACTAAAACAAGCATGGTGATTATCGGCATAAC    950

BSNT_04922___    951 GGTCTTTTATTTTTCTCTCTGGCCGGATGACGCCAATCAAGTCATGATGT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge    951 GGTCTTTTATTTTTCTCTCTGGCCGGATGACGCCAATCAAGTCATGATGT   1000

BSNT_04922___   1001 ATAGCGATTATCTTGGCTATATTTTTGTCTCCCTGTTTCTGCTTCCGTTC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33060___ge   1001 ATAGCGATTATCTTGGCTATATTTTTGTCTCCCTGTTTCTGCTTCCGTTC   1050

BSNT_04922___   1051 ATTCTCTTTTTCATTGTAGCTCTCAAGAGGAGGATTACAGCAAAATGA   1098
                     |||||||||||||||||||||||||||||||||||||||.||||||||
BSU33060___ge   1051 ATTCTCTTTTTCATTGTAGCTCTCAAGAGGAGGATTACAACAAAATGA   1098


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