Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04917 and BSU33030

See Amino acid alignment / Visit BSNT_04917 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:24
# Commandline: needle
#    -asequence dna-align/BSNT_04917___yuxN.1.22522.seq
#    -bsequence dna-align/BSU33030___yuxN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04917___yuxN-BSU33030___yuxN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04917___yuxN-BSU33030___yuxN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04917___yuxN
# 2: BSU33030___yuxN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 876
# Identity:     870/876 (99.3%)
# Similarity:   870/876 (99.3%)
# Gaps:           0/876 ( 0.0%)
# Score: 4326.0
# 
#
#=======================================

BSNT_04917___      1 TTGAAGGAAAAAGAAAAACTGATTATTGAAACAGCCTTAAAACTATTTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu      1 TTGAAGGAAAAAGAAAAACTGATTATTGAAACAGCCTTAAAACTATTTGC     50

BSNT_04917___     51 CCAAAAAGGATACAACTCAACATCAGTTCAGGAAATCGCAAAAGAATGCA    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU33030___yu     51 CCAAAAAGGATACAACTCAACATCAGTCCAGGAAATCGCAAAAGAATGCA    100

BSNT_04917___    101 AAATATCTAAAGGCGCTTTTTATATTTATTTTCCTTCGAAAGAAGCGCTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    101 AAATATCTAAAGGCGCTTTTTATATTTATTTTCCTTCGAAAGAAGCGCTT    150

BSNT_04917___    151 CTTCTCTCTATGCTGAACTACTATTATGATAAAACGTTTACCCGAATTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    151 CTTCTCTCTATGCTGAACTACTATTATGATAAAACGTTTACCCGAATTTT    200

BSNT_04917___    201 AAATATTAAAACGAAGGGCGACAGCCCCAGAACGGCTTACCGTAAACAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    201 AAATATTAAAACGAAGGGCGACAGCCCCAGAACGGCTTACCGTAAACAGC    250

BSNT_04917___    251 TGACCGTCCTCTATGAAAACATTCTTGAACACAAAGATTTTATCAGCATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    251 TGACCGTCCTCTATGAAAACATTCTTGAACACAAAGATTTTATCAGCATG    300

BSNT_04917___    301 CAGTTGAAGGAGGGTTCTCTGCCTTACACAGAAGAAGTGGAGCAATGCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    301 CAGTTGAAGGAGGGTTCTCTGCCTTACACAGAAGAAGTGGAGCAATGCGC    350

BSNT_04917___    351 AAAAAAGATCCGCCAGTCCTCACTTCAATTTCATATCGACAGCCTGCTGA    400
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    351 AAAAAAAATCCGCCAGTCCTCACTTCAATTTCATATCGACAGCCTGCTGA    400

BSNT_04917___    401 ACATCTATGGAAAAAAAGCGGAACCGTACACTGCTGAGCTTTGTTTTTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    401 ACATCTATGGAAAAAAAGCGGAACCGTACACTGCTGAGCTTTGTTTTTTA    450

BSNT_04917___    451 ATAGAGGGCATCAGCCAGATTTACCTGGAGTGCATGATTTTGCTCGGGTA    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU33030___yu    451 ATAGAGGGCATCAGCCAGATTTACCTGGAATGCATGATTTTGCTCGGGTA    500

BSNT_04917___    501 CACTGTGAAGCCGTCTCAATTAGCTGATATCATTATGAATCGAATTGATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    501 CACTGTGAAGCCGTCTCAATTAGCTGATATCATTATGAATCGAATTGATG    550

BSNT_04917___    551 ATATGGTAAAAGGCATGTCTGAACGAAACGATAAGCCTTTCATCACATTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    551 ATATGGTAAAAGGCATGTCTGAACGAAACGATAAGCCTTTCATCACATTG    600

BSNT_04917___    601 GAAGAGGCGAGCTCTTTATTCGGGCCTCTTACGCACGGACGGCCTGACCC    650
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU33030___yu    601 GAAGAGGCGAGCTCTTTATTCGGACCTCTTACGCACGGACGGCCTGACCC    650

BSNT_04917___    651 GCTGACTGAATCGATTGTGAAAAGCCTACGTGACAAAATTAACAGCTTAA    700
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU33030___yu    651 GCTGACTGAATCAATTGTGAAAAGCCTACGTGACAAAATTAACAGCTTAA    700

BSNT_04917___    701 ACACAAACTCCTCTCTTGAATTATCGGAGAGCTTGGACATACTTGAAGCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    701 ACACAAACTCCTCTCTTGAATTATCGGAGAGCTTGGACATACTTGAAGCA    750

BSNT_04917___    751 GAAATGAAGAAAAAAACACCGAAGCTGGCGATCATAAAAGGAATGATTCA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33030___yu    751 GAAATGAAGAAAAAAACACCGAAGCTGGCGATCATAAAAGGAATGATTCA    800

BSNT_04917___    801 TAATCTGACGGAGTCTGAAGCTCTCGCCAAAGATGCGGAGCAGCTTAAAT    850
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU33030___yu    801 TAATCTGACGGAGTCTGAAGCTCTCGCCAAAGATGCGGAACAGCTTAAAT    850

BSNT_04917___    851 ATTTATTAAAACAGCAACATATTTAG    876
                     ||||||||||||||||||||||||||
BSU33030___yu    851 ATTTATTAAAACAGCAACATATTTAG    876


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