Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04914 and BSU33010

See Amino acid alignment / Visit BSNT_04914 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:23
# Commandline: needle
#    -asequence dna-align/BSNT_04914___cssR.1.22522.seq
#    -bsequence dna-align/BSU33010___cssR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04914___cssR-BSU33010___cssR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04914___cssR-BSU33010___cssR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04914___cssR
# 2: BSU33010___cssR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity:     672/678 (99.1%)
# Similarity:   672/678 (99.1%)
# Gaps:           0/678 ( 0.0%)
# Score: 3336.0
# 
#
#=======================================

BSNT_04914___      1 TTGTCATACACCATTTATCTAGTTGAAGATGAGGATAACCTGAATGAACT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs      1 TTGTCATACACCATTTATCTAGTTGAAGATGAGGATAACCTGAATGAACT     50

BSNT_04914___     51 GCTGACGAAGTATTTAGAGAATGAGGGCTGGAACATTACATCTTTTACGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs     51 GCTGACGAAGTATTTAGAGAATGAGGGCTGGAACATTACATCTTTTACGA    100

BSNT_04914___    101 AAGGTGAAGACGCCAGAAAGAAAATGACACCGTCTCCCCACCTATGGATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    101 AAGGTGAAGACGCCAGAAAGAAAATGACACCGTCTCCCCACCTATGGATT    150

BSNT_04914___    151 CTTGATATCATGCTGCCGGATACCGACGGCTATACATTAATAAAAGAAAT    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    151 CTCGATATCATGCTGCCGGATACCGACGGCTATACATTAATAAAAGAAAT    200

BSNT_04914___    201 CAAGGCGAAAGATCCTGACGTGCCGGTCATTTTTATTTCCGCCCGAGATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    201 CAAGGCGAAAGATCCTGACGTGCCGGTCATTTTTATTTCCGCCCGAGATG    250

BSNT_04914___    251 CGGATATTGACAGAGTGCTTGGCTTAGAGCTTGGCAGCAATGACTACATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    251 CGGATATTGACAGAGTGCTTGGCTTAGAGCTTGGCAGCAATGACTACATT    300

BSNT_04914___    301 TCAAAGCCGTTTCTGCCGCGGGAGCTGATTATCCGTGTGCAAAAGCTGCT    350
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU33010___cs    301 TCAAAGCCGTTTTTGCCGCGGGAGCTGATTATCCGTGTGCAAAAGCTGCT    350

BSNT_04914___    351 GCAGCTCGTATATAAGGAAGCTCCTCCTGTCCAAAAAAATGAAATTGCCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    351 GCAGCTCGTATATAAGGAAGCTCCTCCTGTCCAAAAAAATGAAATTGCCG    400

BSNT_04914___    401 TCTCCTCGTATCGGGTCGCTGAAGACGCCCGCGAGGTCTATGACGAAAAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    401 TCTCCTCGTATCGGGTCGCTGAAGACGCCCGCGAGGTCTATGACGAAAAC    450

BSNT_04914___    451 GGGAATATTATCAATTTGACGTCAAAGGAATTTGATCTGCTGCTATTATT    500
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    451 GGGAATATCATCAATTTGACGTCAAAGGAATTTGATCTGCTGCTATTATT    500

BSNT_04914___    501 TATCCATCATAAAGGGCATCCGTACTCTCGTGAGGATATCCTCCTAAAAG    550
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU33010___cs    501 TATCCATCATAAAGGGCATCCATACTCTCGTGAGGATATCCTCCTAAAAG    550

BSNT_04914___    551 TGTGGGGGCATGACTACTTCGGAACAGACCGGGTCGTTGATGATCTCGTC    600
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    551 TGTGGGGACATGACTACTTCGGAACAGACCGGGTCGTTGATGATCTCGTC    600

BSNT_04914___    601 CGGAGACTGCGCAGAAAGATGCCTGAATTGAAGGTGGAGACGATTTACGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs    601 CGGAGACTGCGCAGAAAGATGCCTGAATTGAAGGTGGAGACGATTTACGG    650

BSNT_04914___    651 TTTCGGCTACAGGTTGATGTCATCATGA    678
                     |||||||||||||.||||||||||||||
BSU33010___cs    651 TTTCGGCTACAGGATGATGTCATCATGA    678


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