Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04908 and BSU32980

See Amino acid alignment / Visit BSNT_04908 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:23
# Commandline: needle
#    -asequence dna-align/BSNT_04908.1.22522.seq
#    -bsequence dna-align/BSU32980___yusZ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04908-BSU32980___yusZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04908-BSU32980___yusZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04908
# 2: BSU32980___yusZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 843
# Identity:     679/843 (80.5%)
# Similarity:   679/843 (80.5%)
# Gaps:         150/843 (17.8%)
# Score: 3339.0
# 
#
#=======================================

BSNT_04908         0 --------------------------------------------------      0
                                                                       
BSU32980___yu      1 ATGAATAAAAAAATAGCCATCGTGACAGGAGCGTCCAGCGGCTTCGGTCT     50

BSNT_04908         0 --------------------------------------------------      0
                                                                       
BSU32980___yu     51 GCTGGCAGCTGTAAAGCTTGCCCGATCATTTTTCGTGATAGCCACATCAA    100

BSNT_04908         0 --------------------------------------------------      0
                                                                       
BSU32980___yu    101 GACAGCCTGAAAAAGCGGAACAGCTTCGAGAATTGGCTGCAGCACACAAT    150

BSNT_04908         1 GTGTCTGATTCTATTCACATTACAGCTCTCGATGTCACCGATGAACAATC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32980___yu    151 GTGTCTGATTCTATTCACATTACAGCTCTCGATGTCACCGATGAACAATC    200

BSNT_04908        51 TATAGTCTCATTCGGAAAAGCCATTAGTGCTTACGCCCCGATCGACTTAC    100
                     |||||||||||||||||||||..||||||||||||||||||||||.||||
BSU32980___yu    201 TATAGTCTCATTCGGAAAAGCTGTTAGTGCTTACGCCCCGATCGATTTAC    250

BSNT_04908       101 TCGTTAACAACGCCGGAACGGCTTATGGAGGATTTATCGAGGATGTGCCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32980___yu    251 TCGTTAACAACGCCGGAACGGCTTATGGAGGATTTATCGAGGATGTGCCG    300

BSNT_04908       151 ATGGAACATTTCAGAGAACAATTTGAAACGAATGTCTTCGGTGTGATCCA    200
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU32980___yu    301 ATGGAACATTTCAGACAACAATTTGAAACGAATGTCTTCGGTGTGATCCA    350

BSNT_04908       201 TGTGACAAAAACCGTTCTCCCTTACATAAGAAAGCATGGCGGCGCAAAGA    250
                     |||||||||||||||.||.|||||||||||||||||||||||||||||||
BSU32980___yu    351 TGTGACAAAAACCGTGCTGCCTTACATAAGAAAGCATGGCGGCGCAAAGA    400

BSNT_04908       251 TTATAAACGTGAGCAGCATCAGCGGACTGACCGGATTCCCAGCGCTGTCG    300
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU32980___yu    401 TTATAAACGTGAGCAGCATCAGCGGACTGACAGGATTCCCAGCGCTGTCG    450

BSNT_04908       301 CCATATGTTTCTTCTAAGCATGCATTGGAAGGTTTTTCTGAAAGCCTGCG    350
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU32980___yu    451 CCATATGTTTCTTCCAAGCATGCATTGGAAGGTTTTTCTGAAAGCCTGCG    500

BSNT_04908       351 TATCGAGCTGCTTCCGTTCGGTATCGAAACCGCTTTGATCGAGCCGGGCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32980___yu    501 TATCGAGCTGCTTCCGTTCGGTATCGAAACCGCTTTGATCGAGCCGGGCT    550

BSNT_04908       401 CATACAAGACATCGATCTGGTCAACGTCATTATCAAATTTTATGTCGGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32980___yu    551 CATACAAGACATCGATCTGGTCAACGTCATTATCAAATTTTATGTCGGTG    600

BSNT_04908       451 CCTGCTGACGATTCAGCCTATCATCAATACTATAAAAAGATCCTTTCCTA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32980___yu    601 CCTGCTGACGATTCAGCCTATCATCAATACTATAAAAAGATCCTTTCCTA    650

BSNT_04908       501 TGTTCAAAAAACCGGAGAAGAAAGCGGAGATCCCCAAGAGGTTGCCGACC    550
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU32980___yu    651 TGTTCAAAAAAACGGAGAAGAAAGCGGAGATCCCCAAGAGGTTGCCGACC    700

BSNT_04908       551 TCATTTATCAATTGGCAACAAAACAGCACATAAAGAAATTGCGATACCCG    600
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU32980___yu    701 TCATTTATCAATTGGCAACAAAACAGCACATAAAGAATTTGCGATACCCG    750

BSNT_04908       601 ATCGGAAAGGGCATCAAGCTCACCCTGCTATTCCGATCGCTTTTTCCTTG    650
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU32980___yu    751 ATCGGAAAGGGCATCAAGCTCACCCTGCTGTTCCGATCGCTTTTTCCTTG    800

BSNT_04908       651 GTCTGCGTGGGAGTCTATCCTGAAGAAAAAGCTATTCAAATAA    693
                     ||||||||||||||||||||||||||||||||||||||..|.|
BSU32980___yu    801 GTCTGCGTGGGAGTCTATCCTGAAGAAAAAGCTATTCAGCTGA    843


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