Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04888 and BSU32950

See Amino acid alignment / Visit BSNT_04888 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:23
# Commandline: needle
#    -asequence dna-align/BSNT_04888___yusW.1.22522.seq
#    -bsequence dna-align/BSU32950___yusW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04888___yusW-BSU32950___yusW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04888___yusW-BSU32950___yusW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04888___yusW
# 2: BSU32950___yusW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity:     431/438 (98.4%)
# Similarity:   431/438 (98.4%)
# Gaps:           0/438 ( 0.0%)
# Score: 2127.0
# 
#
#=======================================

BSNT_04888___      1 ATGCATTTGATCAGAGCAGCCGGGGCTGTATGTCTCGCAGTGGTTCTGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32950___yu      1 ATGCATTTGATCAGAGCAGCCGGGGCTGTATGTCTCGCAGTGGTTCTGAT     50

BSNT_04888___     51 TGCGGGCTGCCGTTTCAATGAAGACCAGCAGCAGGCAGAAGGAGAAAATA    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU32950___yu     51 TGCGGGCTGCCGTTTCAATGAAGACCAGCATCAGGCAGAAGGAGAAAATA    100

BSNT_04888___    101 CAGCCGTCACCCAGCTGAAGTCCGTTCCCTACAGCAATTTTTCGCTTCGT    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU32950___yu    101 CAGCCGTCACCCAGCTGAAGTCCGTTCCCTACAGTAATTTTTCGCTTCGT    150

BSNT_04888___    151 GTGAGCTACGGGGATGGTGAGCATAACCGTTATGAAGGAATCTATACAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32950___yu    151 GTGAGCTACGGGGATGGTGAGCATAACCGTTATGAAGGAATCTATACAAA    200

BSNT_04888___    201 GAACGGAACTCAGGAAAAAGCGGAAATACAGGATAAGCTCTCCGGTGTCA    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU32950___yu    201 GAACGGGACTCAGGAAAAAGCGGAAATACAGGATAAGCTCTCCGGTGTCA    250

BSNT_04888___    251 ATCAGGAGGGAGAAGAAGCATTGGATGAGATGAAAATGATTTTGAGCGAG    300
                     |||||||.|||||||||||.||.|||||||||||||||||||||||||||
BSU32950___yu    251 ATCAGGAAGGAGAAGAAGCGTTAGATGAGATGAAAATGATTTTGAGCGAG    300

BSNT_04888___    301 CTTTCCGTAACAGACCAAATGGCTGAAACAGAAGTGATACACAGTGTGCT    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU32950___yu    301 CTTTCCGTGACAGACCAAATGGCTGAAACAGAAGTGATACACAGTGTGCT    350

BSNT_04888___    351 GGCAGCATTTAATCTGGACAGTCATTATGATCATATCGATTTAAAATTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32950___yu    351 GGCAGCATTTAATCTGGACAGTCATTATGATCATATCGATTTAAAATTGA    400

BSNT_04888___    401 AGCTGAAGGACGGCTCCATCAGAGAAATCAAGAAGTAA    438
                     ||||||||||||||||||||||||||||||||||||||
BSU32950___yu    401 AGCTGAAGGACGGCTCCATCAGAGAAATCAAGAAGTAA    438


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