Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04867 and BSU32830

See Amino acid alignment / Visit BSNT_04867 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:19
# Commandline: needle
#    -asequence dna-align/BSNT_04867___yusK.1.22522.seq
#    -bsequence dna-align/BSU32830___yusK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04867___yusK-BSU32830___yusK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04867___yusK-BSU32830___yusK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04867___yusK
# 2: BSU32830___yusK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1176
# Identity:    1148/1176 (97.6%)
# Similarity:  1148/1176 (97.6%)
# Gaps:           0/1176 ( 0.0%)
# Score: 5628.0
# 
#
#=======================================

BSNT_04867___      1 ATGAAAGAGGCAGTCATTGTGTCAGGTGCAAGAACACCGGTTGGAAAAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu      1 ATGAAAGAGGCAGTCATTGTGTCAGGTGCAAGAACACCGGTTGGAAAAGC     50

BSNT_04867___     51 AAAAAAAGGATCGTTGGCCACCGTTCGTCCGGATGATTTGGGAGCGATTT    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU32830___yu     51 AAAAAAAGGATCGTTGGCCACCGTTCGCCCGGATGATTTGGGAGCGATTT    100

BSNT_04867___    101 GTGTAAAAGAGACACTGAAACGGGCAGGCGGTTACGAAGGTAATATTGAC    150
                     ||||||||||.||.|||||||||||||||||.||||||||.||||||||.
BSU32830___yu    101 GTGTAAAAGAAACGCTGAAACGGGCAGGCGGCTACGAAGGCAATATTGAT    150

BSNT_04867___    151 GATTTGATTATTGGCTGTGCAACGCCTGAAGCGGAGCAGGGGCTTAACAT    200
                     ||.||||||||.|||||||||||.|||||||||||||||||||||||.||
BSU32830___yu    151 GACTTGATTATCGGCTGTGCAACACCTGAAGCGGAGCAGGGGCTTAATAT    200

BSNT_04867___    201 GGCGAGAAATATCGGGGCGCTCGCGGGATTGCCATACACGGTTCCGGCGA    250
                     |||||||||||||||.|||||||||||..||||.||||||||||||||||
BSU32830___yu    201 GGCGAGAAATATCGGTGCGCTCGCGGGCCTGCCGTACACGGTTCCGGCGA    250

BSNT_04867___    251 TTACAGTCAACCGGTATTGCTCTTCAGGCCTTCAGTCTATTGCATATGCA    300
                     |||||||.|||||.|||||||||||||||||||||||||||||.||||||
BSU32830___yu    251 TTACAGTTAACCGCTATTGCTCTTCAGGCCTTCAGTCTATTGCGTATGCA    300

BSNT_04867___    301 GCAGAAAAAATTATGCTGGGCGCCTACGATACAGCGATCGCCGGCGGAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu    301 GCAGAAAAAATTATGCTGGGCGCCTACGATACAGCGATCGCCGGCGGAGC    350

BSNT_04867___    351 AGAATCCATGTCGCAAGTTCCGATGATGGGGCATGTTACCCGTCCGAACC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu    351 AGAATCCATGTCGCAAGTTCCGATGATGGGGCATGTTACCCGTCCGAACC    400

BSNT_04867___    401 TTGCTTTGGCAGAAAAGGCACCGGAATATTATATGAGCATGGGACACACA    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU32830___yu    401 TTGCTTTGGCAGAAAAGGCACCGGAATATTATATGAGCATGGGGCACACA    450

BSNT_04867___    451 GCCGAGCAAGTCGCGAAAAAATACGGCGTCTCCCGTGAGGATCAAGACGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu    451 GCCGAGCAAGTCGCGAAAAAATACGGCGTCTCCCGTGAGGATCAAGACGC    500

BSNT_04867___    501 GTTTGCCGTTCGCAGCCACCAAAACGCCGCTAAAGCCCTTGCAGAAGGAA    550
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU32830___yu    501 GTTTGCCGTTCGCAGCCATCAAAACGCCGCTAAAGCCCTTGCAGAAGGAA    550

BSNT_04867___    551 AATTTAAAGATGAAATTGTACCCGTAGAAGTGACGGTGACAGAAATCGGA    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU32830___yu    551 AATTTAAAGATGAAATTGTACCCGTCGAAGTGACGGTGACAGAAATCGGA    600

BSNT_04867___    601 GAAGACCATAAGCATATGGAAAAACAGTTTGTGTTTTCTCAGGATGAAGG    650
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU32830___yu    601 GAAGACCATAAGCCTATGGAAAAACAGTTTGTGTTTTCTCAGGATGAAGG    650

BSNT_04867___    651 TGTTCGCCCGCAAACGACTGCAGACATCTTATCGACATTGCGCCCGGCGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU32830___yu    651 TGTTCGCCCGCAAACGACTGCAGACATCTTATCGACATTGCGCCCGGCCT    700

BSNT_04867___    701 TTTCCGTTGACGGGACGGTGACTGCGGGCAATTCCTCGCAGACAAGTGAC    750
                     |||||||||||||||||||||||||||||||||||||.||.||.||||||
BSU32830___yu    701 TTTCCGTTGACGGGACGGTGACTGCGGGCAATTCCTCACAAACGAGTGAC    750

BSNT_04867___    751 GGAGCGGCGGCTGTCATGCTGATGGACCGGGAAAAAGCCGATGCTCTTGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu    751 GGAGCGGCGGCTGTCATGCTGATGGACCGGGAAAAAGCCGATGCTCTTGG    800

BSNT_04867___    801 CCTGGCGCCGCTTGTGAAATTCCGCTCCTTTGCGGTAGGCGGCGTGCCGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu    801 CCTGGCGCCGCTTGTGAAATTCCGCTCCTTTGCGGTAGGCGGCGTGCCGC    850

BSNT_04867___    851 CGGAAGTGATGGGAATCGGACCGGTGGAAGCGATTCCGCGCGCTTTGAAG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu    851 CGGAAGTGATGGGAATCGGACCGGTGGAAGCGATTCCGCGCGCTTTGAAG    900

BSNT_04867___    901 CTTGCCGGACTTCAGCTGCAGGACATCGGCTTGTTTGAACTGAATGAAGC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu    901 CTTGCCGGACTTCAGCTGCAGGACATCGGCTTGTTTGAACTGAATGAAGC    950

BSNT_04867___    951 TTTTGCCTCACAGGCCATTCAAGTAATCAGGGAATTGGGAATTGATGAAG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu    951 TTTTGCCTCACAGGCCATTCAAGTAATCAGGGAATTGGGAATTGATGAAG   1000

BSNT_04867___   1001 AAAAAGTGAATGTCAACGGGGGCGCAATCGCGCTTGGACACCCGCTTGGC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32830___yu   1001 AAAAAGTGAATGTCAACGGGGGCGCAATCGCGCTTGGACACCCGCTTGGC   1050

BSNT_04867___   1051 TGTACGGGCACGAAGCTTACACTCTCACTCATCCATGAAATGAAACGGAG   1100
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU32830___yu   1051 TGTACGGGCACAAAGCTTACACTCTCACTCATCCATGAAATGAAACGGAG   1100

BSNT_04867___   1101 AAATGAGCAATTTGGAGTCGTGACCATGTGTATCGGCGGCGGGATGGGAG   1150
                     |||.||||||||||||||||||||||||||||||||||||||.|||||||
BSU32830___yu   1101 AAACGAGCAATTTGGAGTCGTGACCATGTGTATCGGCGGCGGAATGGGAG   1150

BSNT_04867___   1151 CGGCCGGTGTATTTGAATTATGCTAA   1176
                     ||||||||||||||||||||||||||
BSU32830___yu   1151 CGGCCGGTGTATTTGAATTATGCTAA   1176


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