Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04858 and BSU32760

See Amino acid alignment / Visit BSNT_04858 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:17
# Commandline: needle
#    -asequence dna-align/BSNT_04858___yusD.1.22522.seq
#    -bsequence dna-align/BSU32760___yusD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04858___yusD-BSU32760___yusD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04858___yusD-BSU32760___yusD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04858___yusD
# 2: BSU32760___yusD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     343/345 (99.4%)
# Similarity:   343/345 (99.4%)
# Gaps:           0/345 ( 0.0%)
# Score: 1707.0
# 
#
#=======================================

BSNT_04858___      1 ATGGAGAAAGCGGAAGTTTTAGAAGATGAGTATCAGCATCTGTTTTTAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32760___yu      1 ATGGAGAAAGCGGAAGTTTTAGAAGATGAGTATCAGCATCTGTTTTTAAA     50

BSNT_04858___     51 ACCCCTTTTGAATGCCTCAACATTGCTCATTACCTTCCAAGGAGAAGCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32760___yu     51 ACCCCTTTTGAATGCCTCAACATTGCTCATTACCTTCCAAGGAGAAGCAG    100

BSNT_04858___    101 AAGCCTTAACCGTCTCAATAAACGAACAGGGAGAAATGAAAAAAGTTTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32760___yu    101 AAGCCTTAACCGTCTCAATAAACGAACAGGGAGAAATGAAAAAAGTTTCT    150

BSNT_04858___    151 CCGCCCCAAACGTCCAACCTGACCTTTTACGGAAACCAAACGGAAATTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32760___yu    151 CCGCCCCAAACGTCCAACCTGACCTTTTACGGAAACCAAACGGAAATTAT    200

BSNT_04858___    201 TGATTTATTGCACGGAGACATTTCCCTTCAGCACCTGATTCAGAGCGGAA    250
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU32760___yu    201 TGATTTATTGCACGGAGACATTTCCCTTCAGCACCTTATTCAGAGCGGAA    250

BSNT_04858___    251 GCCTCAAAGTAAAGGGGTCATTCAGGGCCCTGTTAAAGCTGGAAGCCATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32760___yu    251 GCCTCAAAGTAAAGGGGTCATTCAGGGCCCTGTTAAAGCTGGAAGCCATT    300

BSNT_04858___    301 CTCTGGCTGACAAATGGATTTTTTCAGAGGGTTTTAAAAAATTAA    345
                     ||||||||||||||||||||||||||||||.||||||||||||||
BSU32760___yu    301 CTCTGGCTGACAAATGGATTTTTTCAGAGGATTTTAAAAAATTAA    345


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