Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04827 and BSU32580
See
Amino acid alignment /
Visit
BSNT_04827 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence dna-align/BSNT_04827.1.22522.seq
# -bsequence dna-align/BSU32580___frlM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04827-BSU32580___frlM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04827-BSU32580___frlM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04827
# 2: BSU32580___frlM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 903
# Identity: 483/903 (53.5%)
# Similarity: 483/903 (53.5%)
# Gaps: 414/903 (45.8%)
# Score: 2391.0
#
#
#=======================================
BSNT_04827 0 -------------------------------------------------- 0
BSU32580___fr 1 ATGCTGCCTCAGAAGAAGACAGATTCGTTCAGATTGGAGCCGGTGCCTGA 50
BSNT_04827 0 -------------------------------------------------- 0
BSU32580___fr 51 CCAGCACATTGAGGTGAAAGATAAGCCTAGACGAAAATGGTATATCGGAG 100
BSNT_04827 0 -------------------------------------------------- 0
BSU32580___fr 101 AAACGTCTGTGTGGGTTTTTCTGTTTCTTTATCTGATTGCGATTGCCTAT 150
BSNT_04827 0 -------------------------------------------------- 0
BSU32580___fr 151 CCGCTTCTCTGGATGGTGATGAGCGCCTTTAAAAACTCTGACGATATTTT 200
BSNT_04827 0 -------------------------------------------------- 0
BSU32580___fr 201 TGAGCACAGCTGGTCGCTGCCGTCTTCGTGGCATCCGGAAAATTTTGTTT 250
BSNT_04827 0 -------------------------------------------------- 0
BSU32580___fr 251 CCGCCTGGAATCAGGGGATTTCTTCTTATTTTATGAACAGTGTCATCGTT 300
BSNT_04827 0 -------------------------------------------------- 0
BSU32580___fr 301 ACGGCGCTGACGTGTGTGATCACTGTCTTTATCAGTGCATGGGCAGCGTA 350
BSNT_04827 0 -------------------------------------------------- 0
BSU32580___fr 351 TGGCCTTTCCCGGTTTGAGTTTAAAGGAAAAGGATTCTTTTTGGTGCTAT 400
BSNT_04827 1 --------------ATGCTGACGCCGCAGGTCAGTCTTATGCCGCTTTAT 36
||||||||||||||||||||||||.|||||||||||
BSU32580___fr 401 GTCTTGGCGGATTGATGCTGACGCCGCAGGTCAGTCTTGTGCCGCTTTAT 450
BSNT_04827 37 TCTATTATTCAGTCGCTTGGCCTGTACAATACGTATTGGGCGTTAATCCT 86
|||||||||||||||||.||||||||||||||||||||||||||||||.|
BSU32580___fr 451 TCTATTATTCAGTCGCTGGGCCTGTACAATACGTATTGGGCGTTAATCTT 500
BSNT_04827 87 GCCGTATGCGGCTTATCGGATCCCATTCACCATCATTTTGATCCGCTCTT 136
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32580___fr 501 GCCGTATGCGGCTTATCGGATCCCATTCACCATCATTTTGATCCGCTCTT 550
BSNT_04827 137 ATTTTCTTTCTATTTCCAAAGAATTGGAGGAGGCGGCCTATTTGGATGGG 186
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU32580___fr 551 ATTTTCTTTCTATTTCAAAAGAATTGGAGGAGGCGGCCTATTTGGATGGG 600
BSNT_04827 187 TGTACAAGTTTTGGAGTATTTTTCAGAATTTTCTTACCGATGAGCGTGCC 236
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU32580___fr 601 TGTACAAGTTTTGGAGTATTTTTCAGAATTTTCTTACCAATGAGCGTGCC 650
BSNT_04827 237 GATTTTGGTGACATCCGGCATTTTGACGGCTTACCATACATGGAATGAGT 286
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32580___fr 651 GATTTTGGTGACATCCGGCATTTTGACGGCTTACCATACATGGAATGAGT 700
BSNT_04827 287 TTATGTTTGCGATTATTTTCATAGATGATGAGAATTTGCGGACCATTCCA 336
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU32580___fr 701 TTATGTTTGCGATTATTTTCATAGATGATGAGAATTTACGGACCATTCCA 750
BSNT_04827 337 GCCGGGCTGATGCAGTTCAGAGACGCGCTGCAGACAGACTGGGGCGTCCT 386
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32580___fr 751 GCCGGGCTGATGCAGTTCAGAGACGCGCTGCAGACAGACTGGGGCGTCCT 800
BSNT_04827 387 GCTGGCGGGGTTAACGATTTCAGCCGCGCCGATTATTATTCTATTTTTAT 436
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32580___fr 801 GCTGGCGGGGTTAACGATTTCAGCCGCGCCGATTATTATTCTATTTTTAT 850
BSNT_04827 437 TGATGCAGAAATATTTTGTCCGCGGGATTGCAAGCGGCAGTGTAAAAGGA 486
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32580___fr 851 TGATGCAGAAATATTTTGTCCGCGGGATTGCAAGCGGCAGTGTAAAAGGA 900
BSNT_04827 487 TAA 489
|||
BSU32580___fr 901 TAA 903
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.