Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04812 and BSU32490

See Amino acid alignment / Visit BSNT_04812 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence dna-align/BSNT_04812___pucC.1.22522.seq
#    -bsequence dna-align/BSU32490___pucC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04812___pucC-BSU32490___pucC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04812___pucC-BSU32490___pucC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04812___pucC
# 2: BSU32490___pucC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity:     818/834 (98.1%)
# Similarity:   818/834 (98.1%)
# Gaps:           0/834 ( 0.0%)
# Score: 4026.0
# 
#
#=======================================

BSNT_04812___      1 TTGAACGGCCAAGTGACAAAAGCAAGGATGAATATTCAATTATGGAGGCC     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU32490___pu      1 TTGAACGGCCAAGTGACAAAAGCAAGGATGAATATTCAATTATGGAGACC     50

BSNT_04812___     51 GACAGCGCTTGATGAGGCCTATTCGCTTTTAGAGAAGCTTGCTCCGGATG    100
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU32490___pu     51 GGCAGCGCTTGATGAGGCCTATTCGCTTTTAGAGAAGCTTGCTCCGGATG    100

BSNT_04812___    101 TGTGTGCCGCATCGGGAAGCACGCTGCTTCAGCTTCAGTGGGACAAAGGA    150
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU32490___pu    101 TGTGTGCCGCATCGGGAAGCACGCTCCTTCAGCTTCAGTGGGACAAAGGA    150

BSNT_04812___    151 ACTCTGCCGAAACAGCACCTTGTCAGCCTTGAAGGGATTGACGAGATGCG    200
                     |||||.||||||||||||||||||||||||||||||||||||||.|||||
BSU32490___pu    151 ACTCTACCGAAACAGCACCTTGTCAGCCTTGAAGGGATTGACGAAATGCG    200

BSNT_04812___    201 AGGGATCAGCGCCAGTGACACCCACGTGTCGATCGGGGCGCTCACATCAC    250
                     ||||||||||.|||||||||||||||||||||||||||.|||||||||||
BSU32490___pu    201 AGGGATCAGCACCAGTGACACCCACGTGTCGATCGGGGGGCTCACATCAC    250

BSNT_04812___    251 TGAATGAATGCAGAAAGAAGCCTTTGATCAAGAGAGCGCTTGGCTGTTTC    300
                     |||||||||||||||||||.||||||||.||||||||||||.||||||||
BSU32490___pu    251 TGAATGAATGCAGAAAGAACCCTTTGATTAAGAGAGCGCTTAGCTGTTTC    300

BSNT_04812___    301 AGTGACGCTGCTTCCGCTGTCGCTGCACCGGGGATTCGCAGCCGTGCCAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32490___pu    301 AGTGACGCTGCTTCCGCTGTCGCTGCACCGGGGATTCGCAGCCGTGCCAC    350

BSNT_04812___    351 GATTGGCGGCAACATAGCGAGTAAAATCGGTGATTTCATTCCGCTTCTGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32490___pu    351 GATTGGCGGCAACATAGCGAGTAAAATCGGTGATTTCATTCCGCTTCTGC    400

BSNT_04812___    401 TTGTGCTTGGTGCTGAGCTTATCGTATATCAAAAGGAGCTCATCAGGCTG    450
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU32490___pu    401 TTGTGCTTGGTGCTGAGCTTATCGTATATCAAAAGGAGCTAATCAGGCTG    450

BSNT_04812___    451 CCGCTTGGCGCTTGGCTCAGTGAGGAAGACTTTAGAACGGCTATCGTCAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32490___pu    451 CCGCTTGGCGCTTGGCTCAGTGAGGAAGACTTTAGAACGGCTATCGTCAC    500

BSNT_04812___    501 GCGTGTCATCATCCCGCGGGCGGAGGGAGAGCGTGTATTTTATCACAAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32490___pu    501 GCGTGTCATCATCCCGCGGGCGGAGGGAGAGCGTGTATTTTATCACAAGC    550

BSNT_04812___    551 TTGGTAGGCGCCAGGCTTTTACAGGAGCGGCTGCTGTTGCAGCTGGACGT    600
                     ||||.|||||||||||||||||.|||||||||||||||||||||||||||
BSU32490___pu    551 TTGGAAGGCGCCAGGCTTTTACCGGAGCGGCTGCTGTTGCAGCTGGACGT    600

BSNT_04812___    601 TTTTTGAAAGACGGCGGCATTCGCCTCGCCGCTGGCCATGCCGATATCAC    650
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU32490___pu    601 TTTTTGAAAGACGGCAGCATTCGCCTCGCCGCTGGCCATGCCGATATCAC    650

BSNT_04812___    651 TCCTAGGAGATTATTGGACAGCGAAGCGAAATGGATGGCACCAGGGTGGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32490___pu    651 TCCTAGGAGATTATTGGACAGCGAAGCGAAATGGATGGCACCAGGGTGGG    700

BSNT_04812___    701 ACTCGCATGAGCTGTACAAAACACTTATCCATGAGCTGCCGTTTTCCTCA    750
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU32490___pu    701 ACCCGCATGAGCTGTACAAAACACTTATCCATGAGCTGCCGTTTTCCTCA    750

BSNT_04812___    751 GATGCTTTTATGTCAGCGGCATACAGAAAAAAAGCCGCTGCCAACGTCAT    800
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU32490___pu    751 GATGTTTTTATGTCAGCGGCATACAGAAAAAAAGCCGCTGCCAACGTCAT    800

BSNT_04812___    801 CATGGCAGAGCTGATGGCTGAGGGAGGGGAATAA    834
                     ||||||||||||||||||||||||||||||||||
BSU32490___pu    801 CATGGCAGAGCTGATGGCTGAGGGAGGGGAATAA    834


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