Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04798 and BSU32430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_04798___pucJ.1.22522.seq
# -bsequence dna-align/BSU32430___pucJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04798___pucJ-BSU32430___pucJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04798___pucJ-BSU32430___pucJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04798___pucJ
# 2: BSU32430___pucJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity: 1329/1353 (98.2%)
# Similarity: 1329/1353 (98.2%)
# Gaps: 3/1353 ( 0.2%)
# Score: 6561.0
#
#
#=======================================
BSNT_04798___ 1 ATGGTGAAAAAAAGATCGTTTAAGGTGTTTACGCTTGGCCTGCAGCATGT 50
|||||||||||||||||||||||||||||.|||.|||||||||||||
BSU32430___pu 1 ---GTGAAAAAAAGATCGTTTAAGGTGTTTACACTTAGCCTGCAGCATGT 47
BSNT_04798___ 51 GCTCGCCATGTATGCAGGCGCGATTTTGGTGCCCCTGCTTGTCGGCAGGG 100
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU32430___pu 48 GCTCGCCATGTATGCAGGTGCGATTTTGGTGCCCCTGCTTGTCGGCAGGG 97
BSNT_04798___ 101 CGCTGAATGTAACAACTGAACAGCTGTCCTACCTATTGGCGATTGACCTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 98 CGCTGAATGTAACAACTGAACAGCTGTCCTACCTATTGGCGATTGACCTG 147
BSNT_04798___ 151 TTAACATGCGGCGTGGCGACGCTTTTGCAAACCTTGCGCGGAGCATACAT 200
||||||||||||||.||.||||||||||||||||||||||||.|||||||
BSU32430___pu 148 TTAACATGCGGCGTCGCTACGCTTTTGCAAACCTTGCGCGGAACATACAT 197
BSNT_04798___ 201 CGGCATCGGGCTTCCCGTCATGCTTGGCAGTTCATTTGTGGCCGTCACCC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 198 CGGCATCGGGCTTCCCGTCATGCTTGGCAGTTCATTTGTGGCCGTCACCC 247
BSNT_04798___ 251 CGATGATTGCAATCGGCAGCAATTACGGCATTCACGCGATTTACGGTTCC 300
|.|||||||||||||||||||||||||||||||||||||||||.||||||
BSU32430___pu 248 CAATGATTGCAATCGGCAGCAATTACGGCATTCACGCGATTTATGGTTCC 297
BSNT_04798___ 301 ATCATCGCGGCCGGTGTGTTCATCTTTTTGTTTGCGCGTTTTTTCGGCAA 350
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 298 ATCATTGCGGCCGGTGTGTTCATCTTTTTGTTTGCGCGTTTTTTCGGCAA 347
BSNT_04798___ 351 GCTGACTGTGTTATTTCCTCCTGTCGTAACAGGTACCGTTGTGACCTTGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 348 GCTGACTGTGTTATTTCCTCCTGTCGTAACAGGTACCGTTGTGACCTTGA 397
BSNT_04798___ 401 TCGGCCTTTCACTTGTTCCGACAGGTGTGAAAAATATGGCTGGCGGCGAA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 398 TCGGCCTTTCACTTGTTCCGACAGGTGTGAAAAATATGGCTGGCGGCGAA 447
BSNT_04798___ 451 AAAATAAACGGCAGTGCCAACCCCGAATACGGTTCGCTCGAAAACCTTCT 500
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU32430___pu 448 AAAATAAACGGCAGCGCCAACCCCGAATACGGTTCGCTCGAAAACCTTCT 497
BSNT_04798___ 501 TCTCTCTGTCGGTGTCCTTGTTCTGATCTTAGTCCTCAACCGCTTTCTCA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 498 TCTCTCTGTCGGTGTCCTTGTTCTGATCTTAGTCCTCAACCGCTTTCTCA 547
BSNT_04798___ 551 AAGGATTTGCCCGAACACTATCCGTTCTGATCGGCATCGCCGCCGGAACA 600
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU32430___pu 548 AAGGATTTGCCCGAACACTGTCCGTTCTGATCGGCATCGCCGCCGGAACA 597
BSNT_04798___ 601 GCGGCAGCAGCGATCATGGGCAAAGTCAGCTTTTCTTCTGTTACAGAAGC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 598 GCGGCAGCAGCGATCATGGGCAAAGTCAGCTTTTCTTCTGTTACAGAAGC 647
BSNT_04798___ 651 ACCGTTCTTCCAAATCCCGAAGCCTTTTTACTTCGGAGCCCCCACGTTTG 700
||||||||||||||||||||||||||||||||||||||||||..||||||
BSU32430___pu 648 ACCGTTCTTCCAAATCCCGAAGCCTTTTTACTTCGGAGCCCCTGCGTTTG 697
BSNT_04798___ 701 AAATCGGTCCGATCTTAACGATGCTGATCGTCGGAATCGTCATTATTGTG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 698 AAATCGGTCCGATCTTAACGATGCTGATCGTCGGAATCGTCATTATTGTG 747
BSNT_04798___ 751 GAATCAACCGGCGTTTTTTACGCAATCGGAAAGATATGCGGCAGACCTTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 748 GAATCAACCGGCGTTTTTTACGCAATCGGAAAGATATGCGGCAGACCTTT 797
BSNT_04798___ 801 AACTGAAAAAGATCTCGTCAAAGGCTATCGAGCGGAAGGAATCGCCATTC 850
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 798 AACTGACAAAGATCTCGTCAAAGGCTATCGAGCGGAAGGAATCGCCATTC 847
BSNT_04798___ 851 TCATCGGCGGGCTGTTCAATGCCTTTCCTTATAATACCTTTGCGCAAAAC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 848 TCATCGGCGGGCTGTTCAATGCCTTTCCTTATAATACCTTTGCGCAAAAC 897
BSNT_04798___ 901 GCCGGCTTATTGCAGCTGACCAAAGTGAAAACAAGAAACATCGTCGTTAC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 898 GCCGGCTTATTGCAGCTGACCAAAGTGAAAACAAGAAACATCGTCGTTAC 947
BSNT_04798___ 951 CGCAGGCTGTATCCTTGTCTGTCTCGGACTGATTCCGAAGATTGCCGCCC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 948 CGCAGGCTGTATCCTTGTCTGTCTCGGACTGATTCCGAAGATTGCCGCCC 997
BSNT_04798___ 1001 TTGCATCTGCCGTTCCTGCTGCTGTACTTGGCGGCGCGACCGTCGTCATG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 998 TTGCATCTGCCGTTCCTGCTGCTGTACTTGGCGGCGCGACCGTCGTCATG 1047
BSNT_04798___ 1051 TTCGGCATGGTGATTGCCTCCGGCGTCAAAATGCTCAGCACAGCGGATCT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 1048 TTCGGCATGGTGATTGCCTCCGGCGTCAAAATGCTCAGCACAGCGGATCT 1097
BSNT_04798___ 1101 CAAAAATCAATACCACCTCCTAACCATCGCATGCTCAATCGCACTCGGCA 1150
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU32430___pu 1098 CAAAAATCAATACCACCTCCTGACCATCGCATGCTCAATCGCACTCGGCA 1147
BSNT_04798___ 1151 TCGGCGCCAGCACGGCCCCCGGGATTTTTGCTGAATTCCCCGCTCCGATT 1200
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU32430___pu 1148 TCGGCGCCAGCACGGCCCCCGGGATTTTTGCTGAATTCCCCGCTCCGATC 1197
BSNT_04798___ 1201 AGAATTCTGGTCAGTGACGGCACCATCACTGGCAGCCTGACCGCCATCTT 1250
.|.||||||||||||||||||||||||||.||.|||||.|||||||||||
BSU32430___pu 1198 CGGATTCTGGTCAGTGACGGCACCATCACCGGAAGCCTAACCGCCATCTT 1247
BSNT_04798___ 1251 TTTGAATCTATTTTTCAGCTTGCGCGACAAAAAAGAATTAACAGCACAGC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 1248 TTTGAATCTATTTTTCAGCTTGCGCGACAAAAAAGAATTAACAGCACAGC 1297
BSNT_04798___ 1301 AAACAGAACTTCCGGTATTAGAACATACACTCGCATTAGAAAAAGAGGTG 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu 1298 AAACAGAACTTCCGGTATTAGAACATACACTCGCATTAGAAAAAGAGGTG 1347
BSNT_04798___ 1351 TAA 1353
|||
BSU32430___pu 1348 TAA 1350
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