Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04798 and BSU32430

See Amino acid alignment / Visit BSNT_04798 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence dna-align/BSNT_04798___pucJ.1.22522.seq
#    -bsequence dna-align/BSU32430___pucJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04798___pucJ-BSU32430___pucJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04798___pucJ-BSU32430___pucJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04798___pucJ
# 2: BSU32430___pucJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity:    1329/1353 (98.2%)
# Similarity:  1329/1353 (98.2%)
# Gaps:           3/1353 ( 0.2%)
# Score: 6561.0
# 
#
#=======================================

BSNT_04798___      1 ATGGTGAAAAAAAGATCGTTTAAGGTGTTTACGCTTGGCCTGCAGCATGT     50
                        |||||||||||||||||||||||||||||.|||.|||||||||||||
BSU32430___pu      1 ---GTGAAAAAAAGATCGTTTAAGGTGTTTACACTTAGCCTGCAGCATGT     47

BSNT_04798___     51 GCTCGCCATGTATGCAGGCGCGATTTTGGTGCCCCTGCTTGTCGGCAGGG    100
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU32430___pu     48 GCTCGCCATGTATGCAGGTGCGATTTTGGTGCCCCTGCTTGTCGGCAGGG     97

BSNT_04798___    101 CGCTGAATGTAACAACTGAACAGCTGTCCTACCTATTGGCGATTGACCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu     98 CGCTGAATGTAACAACTGAACAGCTGTCCTACCTATTGGCGATTGACCTG    147

BSNT_04798___    151 TTAACATGCGGCGTGGCGACGCTTTTGCAAACCTTGCGCGGAGCATACAT    200
                     ||||||||||||||.||.||||||||||||||||||||||||.|||||||
BSU32430___pu    148 TTAACATGCGGCGTCGCTACGCTTTTGCAAACCTTGCGCGGAACATACAT    197

BSNT_04798___    201 CGGCATCGGGCTTCCCGTCATGCTTGGCAGTTCATTTGTGGCCGTCACCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    198 CGGCATCGGGCTTCCCGTCATGCTTGGCAGTTCATTTGTGGCCGTCACCC    247

BSNT_04798___    251 CGATGATTGCAATCGGCAGCAATTACGGCATTCACGCGATTTACGGTTCC    300
                     |.|||||||||||||||||||||||||||||||||||||||||.||||||
BSU32430___pu    248 CAATGATTGCAATCGGCAGCAATTACGGCATTCACGCGATTTATGGTTCC    297

BSNT_04798___    301 ATCATCGCGGCCGGTGTGTTCATCTTTTTGTTTGCGCGTTTTTTCGGCAA    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    298 ATCATTGCGGCCGGTGTGTTCATCTTTTTGTTTGCGCGTTTTTTCGGCAA    347

BSNT_04798___    351 GCTGACTGTGTTATTTCCTCCTGTCGTAACAGGTACCGTTGTGACCTTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    348 GCTGACTGTGTTATTTCCTCCTGTCGTAACAGGTACCGTTGTGACCTTGA    397

BSNT_04798___    401 TCGGCCTTTCACTTGTTCCGACAGGTGTGAAAAATATGGCTGGCGGCGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    398 TCGGCCTTTCACTTGTTCCGACAGGTGTGAAAAATATGGCTGGCGGCGAA    447

BSNT_04798___    451 AAAATAAACGGCAGTGCCAACCCCGAATACGGTTCGCTCGAAAACCTTCT    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU32430___pu    448 AAAATAAACGGCAGCGCCAACCCCGAATACGGTTCGCTCGAAAACCTTCT    497

BSNT_04798___    501 TCTCTCTGTCGGTGTCCTTGTTCTGATCTTAGTCCTCAACCGCTTTCTCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    498 TCTCTCTGTCGGTGTCCTTGTTCTGATCTTAGTCCTCAACCGCTTTCTCA    547

BSNT_04798___    551 AAGGATTTGCCCGAACACTATCCGTTCTGATCGGCATCGCCGCCGGAACA    600
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU32430___pu    548 AAGGATTTGCCCGAACACTGTCCGTTCTGATCGGCATCGCCGCCGGAACA    597

BSNT_04798___    601 GCGGCAGCAGCGATCATGGGCAAAGTCAGCTTTTCTTCTGTTACAGAAGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    598 GCGGCAGCAGCGATCATGGGCAAAGTCAGCTTTTCTTCTGTTACAGAAGC    647

BSNT_04798___    651 ACCGTTCTTCCAAATCCCGAAGCCTTTTTACTTCGGAGCCCCCACGTTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||..||||||
BSU32430___pu    648 ACCGTTCTTCCAAATCCCGAAGCCTTTTTACTTCGGAGCCCCTGCGTTTG    697

BSNT_04798___    701 AAATCGGTCCGATCTTAACGATGCTGATCGTCGGAATCGTCATTATTGTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    698 AAATCGGTCCGATCTTAACGATGCTGATCGTCGGAATCGTCATTATTGTG    747

BSNT_04798___    751 GAATCAACCGGCGTTTTTTACGCAATCGGAAAGATATGCGGCAGACCTTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    748 GAATCAACCGGCGTTTTTTACGCAATCGGAAAGATATGCGGCAGACCTTT    797

BSNT_04798___    801 AACTGAAAAAGATCTCGTCAAAGGCTATCGAGCGGAAGGAATCGCCATTC    850
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    798 AACTGACAAAGATCTCGTCAAAGGCTATCGAGCGGAAGGAATCGCCATTC    847

BSNT_04798___    851 TCATCGGCGGGCTGTTCAATGCCTTTCCTTATAATACCTTTGCGCAAAAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    848 TCATCGGCGGGCTGTTCAATGCCTTTCCTTATAATACCTTTGCGCAAAAC    897

BSNT_04798___    901 GCCGGCTTATTGCAGCTGACCAAAGTGAAAACAAGAAACATCGTCGTTAC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    898 GCCGGCTTATTGCAGCTGACCAAAGTGAAAACAAGAAACATCGTCGTTAC    947

BSNT_04798___    951 CGCAGGCTGTATCCTTGTCTGTCTCGGACTGATTCCGAAGATTGCCGCCC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    948 CGCAGGCTGTATCCTTGTCTGTCTCGGACTGATTCCGAAGATTGCCGCCC    997

BSNT_04798___   1001 TTGCATCTGCCGTTCCTGCTGCTGTACTTGGCGGCGCGACCGTCGTCATG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu    998 TTGCATCTGCCGTTCCTGCTGCTGTACTTGGCGGCGCGACCGTCGTCATG   1047

BSNT_04798___   1051 TTCGGCATGGTGATTGCCTCCGGCGTCAAAATGCTCAGCACAGCGGATCT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu   1048 TTCGGCATGGTGATTGCCTCCGGCGTCAAAATGCTCAGCACAGCGGATCT   1097

BSNT_04798___   1101 CAAAAATCAATACCACCTCCTAACCATCGCATGCTCAATCGCACTCGGCA   1150
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU32430___pu   1098 CAAAAATCAATACCACCTCCTGACCATCGCATGCTCAATCGCACTCGGCA   1147

BSNT_04798___   1151 TCGGCGCCAGCACGGCCCCCGGGATTTTTGCTGAATTCCCCGCTCCGATT   1200
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU32430___pu   1148 TCGGCGCCAGCACGGCCCCCGGGATTTTTGCTGAATTCCCCGCTCCGATC   1197

BSNT_04798___   1201 AGAATTCTGGTCAGTGACGGCACCATCACTGGCAGCCTGACCGCCATCTT   1250
                     .|.||||||||||||||||||||||||||.||.|||||.|||||||||||
BSU32430___pu   1198 CGGATTCTGGTCAGTGACGGCACCATCACCGGAAGCCTAACCGCCATCTT   1247

BSNT_04798___   1251 TTTGAATCTATTTTTCAGCTTGCGCGACAAAAAAGAATTAACAGCACAGC   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu   1248 TTTGAATCTATTTTTCAGCTTGCGCGACAAAAAAGAATTAACAGCACAGC   1297

BSNT_04798___   1301 AAACAGAACTTCCGGTATTAGAACATACACTCGCATTAGAAAAAGAGGTG   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32430___pu   1298 AAACAGAACTTCCGGTATTAGAACATACACTCGCATTAGAAAAAGAGGTG   1347

BSNT_04798___   1351 TAA   1353
                     |||
BSU32430___pu   1348 TAA   1350


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