Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_04787 and BSU32350

See Amino acid alignment / Visit BSNT_04787 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence dna-align/BSNT_04787___yunB.1.22522.seq
#    -bsequence dna-align/BSU32350___yunB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04787___yunB-BSU32350___yunB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04787___yunB-BSU32350___yunB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04787___yunB
# 2: BSU32350___yunB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     723/768 (94.1%)
# Similarity:   723/768 (94.1%)
# Gaps:          42/768 ( 5.5%)
# Score: 3592.0
# 
#
#=======================================

BSNT_04787___      1 ---------------------------------------TTGCCTTTCCG     11
                                                            |||||||||||
BSU32350___yu      1 TTGCCAAGATATCGCGGCCCTTTTCGCAAGAGAGGACCTTTGCCTTTCCG     50

BSNT_04787___     12 TTACGTGATGCTCCTGTCCGTTGTCTTTTTTATCCTGTCAACAACGGTCA     61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu     51 TTACGTGATGCTCCTGTCCGTTGTCTTTTTTATCCTGTCAACAACGGTCA    100

BSNT_04787___     62 GCCTTTGGATGATCAATGGCTCGATCAAACCTGTTTTAATGGACATCGGC    111
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    101 GCCTTTGGATGATCAATGGCTCGATCAAACCTGTTTTAATGGACATCGGC    150

BSNT_04787___    112 GAGATGGAAACGAAGCGTATAGCGACAGAGGTGATCCAGGATTCGATTGA    161
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    151 GAGATGGAAACGAAGCGTATAGCGACAGAGGTGATCCAGGATTCGATTGA    200

BSNT_04787___    162 GGACTATATGTCTGACAGTGAAAATATGAAAGATATGTTTCAAATGAATT    211
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    201 GGACTATATGTCTGACAGTGAAAATATGAAAGATATGTTTCAAATGAATT    250

BSNT_04787___    212 CTGATGAAAACGGAAACTTAACGACAATCGATTTTAATACACAGGTTGTA    261
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    251 CTGATGAAAACGGAAACTTAACGACAATCGATTTTAATACACAGGTTGTA    300

BSNT_04787___    262 AACAGTGTGAAAACAAAAGTGACAAAGCAGCTTCAGGCTCATTTGAAAGA    311
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    301 AACAGTGTGAAAACAAAAGTGACAAAGCAGCTTCAGGCTCATTTGAAAGA    350

BSNT_04787___    312 GATGGAAACCCATACCGGACACAGCGGCGCCAGTGAAAACATTATGATCA    361
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    351 GATGGAAACCCATACCGGACACAGCGGCGCCAGTGAAAACATTATGATCA    400

BSNT_04787___    362 ACATTCCGCTGGGACAGGTAACCGGCAACAGCCTTCTTGGAAACCTCGGG    411
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    401 ACATTCCGCTGGGACAGGTAACCGGCAACAGCCTTCTTGGAAACCTCGGG    450

BSNT_04787___    412 CCGAAAATCCCGGTCCGGTTCAATTTAATCGGTGACGCTTTTACAGATGT    461
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    451 CCGAAAATCCCGGTCCGGTTCAATTTAATCGGTGACGCTTTTACAGATGT    500

BSNT_04787___    462 CAAAACCAAAATCAAGCCGTATGGCATAAATAACGCACTTATTGATATCA    511
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    501 CAAAACCAAAATCAAGCCGTATGGCATAAATAACGCACTTATTGATATCA    550

BSNT_04787___    512 GCATCTTTGTCGAAATTAAAGTGAAGGTCATCATTCCATTTGCCAGCAAA    561
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    551 GCATCTTTGTCGAAATTAAAGTGAAGGTCATCATTCCATTTGCCAGCAAA    600

BSNT_04787___    562 ACCGCTGTCGTCACAAATAATGTTCCTGTATCGATTAAAGCAGTGCAGGG    611
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    601 ACCGCTGTCGTCACAAATAATGTTCCTGTATCGATTAAAGCAGTGCAGGG    650

BSNT_04787___    612 CGAAGTGCCGCAGTTTTATAATGGAAGCGGCGGCTCGGGTGTCACGCCTT    661
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32350___yu    651 CGAAGTGCCGCAGTTTTATAATGGAAGCGGCGGCTCGGGTGTCACGCCTT    700

BSNT_04787___    662 CTGTCCAGCTCCCGAGCAGCAAAGAAGAAGACGGTGCTGATTCAAAAAAA    711
                     ||||||||||.||||||||||   |||||.|||||||.||||||||||||
BSU32350___yu    701 CTGTCCAGCTTCCGAGCAGCA---AAGAAAACGGTGCCGATTCAAAAAAA    747

BSNT_04787___    712 GAAAAAAGCAGCAAATAA    729
                     ||||||||||||||||||
BSU32350___yu    748 GAAAAAAGCAGCAAATAA    765


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04787 and BSU32350

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
