Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04783 and BSU32330

See Amino acid alignment / Visit BSNT_04783 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence dna-align/BSNT_04783___lipA.1.22522.seq
#    -bsequence dna-align/BSU32330___lipA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04783___lipA-BSU32330___lipA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04783___lipA-BSU32330___lipA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04783___lipA
# 2: BSU32330___lipA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 897
# Identity:     889/897 (99.1%)
# Similarity:   889/897 (99.1%)
# Gaps:           0/897 ( 0.0%)
# Score: 4413.0
# 
#
#=======================================

BSNT_04783___      1 TTGGCAAAGAAAGACGAACACCTCAGAAAGCCCGAATGGCTTAAAATTAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li      1 TTGGCAAAGAAAGACGAACACCTCAGAAAGCCCGAATGGCTTAAAATTAA     50

BSNT_04783___     51 ATTAAATACAAATGAAAACTATACAGGGCTCAAAAAACTCATGCGGGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li     51 ATTAAATACAAATGAAAACTATACAGGGCTCAAAAAACTCATGCGGGAAA    100

BSNT_04783___    101 ACAACCTGCACACCGTATGCGAAGAAGCAAAGTGCCCGAATATTCATGAA    150
                     ||||||||||.|||||||||||||||||||||||.|||||||||||||||
BSU32330___li    101 ACAACCTGCATACCGTATGCGAAGAAGCAAAGTGTCCGAATATTCATGAA    150

BSNT_04783___    151 TGCTGGGCGGTCAGACGTACAGCGACATTTATGATTTTAGGTTCTGTTTG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    151 TGCTGGGCGGTCAGACGTACAGCGACATTTATGATTTTAGGTTCTGTTTG    200

BSNT_04783___    201 TACAAGAGCATGCCGTTTCTGTGCTGTCAAAACAGGCCTTCCAACTGAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    201 TACAAGAGCATGCCGTTTCTGTGCTGTCAAAACAGGCCTTCCAACTGAGC    250

BSNT_04783___    251 TTGACCTGCAAGAGCCGGAACGCGTAGCGGATTCAGTCGCGCTTATGAAT    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    251 TTGATCTGCAAGAGCCGGAACGCGTAGCGGATTCAGTCGCGCTTATGAAT    300

BSNT_04783___    301 CTGAAACACGCGGTCATTACGGCTGTTGCGCGTGACGATCAGAAAGATGG    350
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    301 TTGAAACACGCGGTCATTACGGCTGTTGCGCGTGACGATCAGAAAGATGG    350

BSNT_04783___    351 AGGGGCAGGCATTTTCGCGGAAACTGTCCGTGCGATCCGCAGAAAAAGCC    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    351 CGGGGCAGGCATTTTCGCGGAAACTGTCCGTGCGATCCGCAGAAAAAGCC    400

BSNT_04783___    401 CGTTCACAACAATTGAGGTGCTGCCGTCTGATATGGGCGGAAACTACGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    401 CGTTCACAACAATTGAGGTGCTGCCGTCTGATATGGGCGGAAACTACGAT    450

BSNT_04783___    451 AACCTAAAAACCTTAATGGATACACGCCCAGACATCCTGAATCACAATAT    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU32330___li    451 AACCTAAAAACCTTGATGGATACACGCCCAGACATCCTGAATCACAATAT    500

BSNT_04783___    501 CGAAACGGTTCGCCGCCTGACGCCAAGAGTCCGCGCGCGTGCGACGTACG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    501 CGAAACGGTTCGCCGCCTGACGCCAAGAGTCCGCGCGCGTGCGACGTACG    550

BSNT_04783___    551 ACCGTTCATTGGAATTTTTGCGCCGTGCGAAGGAAATGCAGCCTGACATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    551 ACCGTTCATTGGAATTTTTGCGCCGTGCGAAGGAAATGCAGCCTGACATT    600

BSNT_04783___    601 CCTACAAAATCAAGTATCATGATCGGACTCGGCGAAACAAAAGAAGAGAT    650
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    601 CCGACAAAATCAAGTATCATGATCGGACTCGGCGAAACAAAAGAAGAGAT    650

BSNT_04783___    651 TATTGAAGTAATGGACGACCTTTTGGCGAACAACGTGGATATTATGGCAA    700
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU32330___li    651 TATTGAAGTAATGGACGACCTCTTGGCGAACAACGTGGATATTATGGCAA    700

BSNT_04783___    701 TCGGCCAATATCTGCAGCCGACGAAGAAACACTTGAAAGTCCAAAAATAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    701 TCGGCCAATATCTGCAGCCGACGAAGAAACACTTGAAAGTCCAAAAATAC    750

BSNT_04783___    751 TACCATCCTGATGAATTTGCAGAATTAAAAGAAATCGCGATGCAAAAAGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    751 TACCATCCTGATGAATTTGCAGAATTAAAAGAAATCGCGATGCAAAAAGG    800

BSNT_04783___    801 CTTCAGCCATTGTGAAGCCGGTCCGCTTGTCCGTTCCTCTTACCATGCGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    801 CTTCAGCCATTGTGAAGCCGGTCCGCTTGTCCGTTCCTCTTACCATGCGG    850

BSNT_04783___    851 ATGAACAAGTAAACGAAGCATCTAAAAAGCGTCAAGCACAAGCATAA    897
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU32330___li    851 ATGAACAAGTAAACGAAGCATCTAAAAAGCGTCAAGCACAAGCATAA    897


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