Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04729 and BSU32140

See Amino acid alignment / Visit BSNT_04729 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence dna-align/BSNT_04729___paiB.1.22522.seq
#    -bsequence dna-align/BSU32140___paiB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04729___paiB-BSU32140___paiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04729___paiB-BSU32140___paiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04729___paiB
# 2: BSU32140___paiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 624
# Identity:     615/624 (98.6%)
# Similarity:   615/624 (98.6%)
# Gaps:           0/624 ( 0.0%)
# Score: 3039.0
# 
#
#=======================================

BSNT_04729___      1 ATGTATATTCCAAAATATTTTAAAGTCACAAATGCTGAAGAAATTTGGAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32140___pa      1 ATGTATATTCCAAAATATTTTAAAGTCACAAATGCTGAAGAAATTTGGAA     50

BSNT_04729___     51 TTTTGTACAAGAAAACTCCTTTGGTACGGTTGTCACAACAGAACAAGGAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32140___pa     51 TTTTGTACAAGAAAACTCCTTTGGTACGGTTGTCACAACAGAACAAGGAA    100

BSNT_04729___    101 AACCAATTGCCACACATTTGCCGTTAGGATTCAATAAAAAAGACGATCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32140___pa    101 AACCAATTGCCACACATTTGCCGTTAGGATTCAATAAAAAAGACGATCAT    150

BSNT_04729___    151 TACTATATTACGGGGCATTTCGCTTATGGAAATCCTCAGTGGAGAACGTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32140___pa    151 TACTATATTACGGGGCATTTCGCTTATGGAAATCCTCAGTGGAGAACGTT    200

BSNT_04729___    201 TGAAGCCTGTGAAGATGTGCTTGTGATGTTTCAGGGACCGCACGCTTATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32140___pa    201 TGAAGCCTGTGAAGATGTGCTTGTGATGTTTCAGGGACCGCACGCTTATA    250

BSNT_04729___    251 TTTCTTCTTCCTGGTATTCGCGCGAAAATGTTCCGACGTGGAATTATCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32140___pa    251 TTTCTTCTTCCTGGTATTCGCGCGAAAATGTTCCGACGTGGAATTATCAG    300

BSNT_04729___    301 GCTGTCCACATGTATGGAAAAGCAAGTATGTTAGAGAAAGATGAATTAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32140___pa    301 GCTGTCCACATGTATGGAAAAGCAAGTATGTTAGAGAAAGATGAATTAGC    350

BSNT_04729___    351 AGAAGAATTAACAATCATGCTGGAGAAATACGAAAAACATCGTGACAATC    400
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU32140___pa    351 AGAAGAATTAACAATCATGTTGGAGAAATACGAAAAACATCGTGACAATC    400

BSNT_04729___    401 CTGTTTTATGGGATAAGCTTTCTCCAAAACTCTTAGAACGTGAATTGAAA    450
                     ||||.|||||||||||||||||||||||||||||||||.|||||||||||
BSU32140___pa    401 CTGTGTTATGGGATAAGCTTTCTCCAAAACTCTTAGAAAGTGAATTGAAA    450

BSNT_04729___    451 GGTATCGTTGGATTTAAGATTAAGGTGGAAGATATTCAAGCGGCATATAA    500
                     |||||.||||||||||||||||||||||||||.|||||||||||||||||
BSU32140___pa    451 GGTATTGTTGGATTTAAGATTAAGGTGGAAGACATTCAAGCGGCATATAA    500

BSNT_04729___    501 ATTAAGCCAGAACCGAAATGAAACGGATTATATGAACATTATTGAACAGT    550
                     |||||||||||||||||||||||||||||||||||||.|.||||||||||
BSU32140___pa    501 ATTAAGCCAGAACCGAAATGAAACGGATTATATGAACGTCATTGAACAGT    550

BSNT_04729___    551 TGCAAAATGAAGAAAATCCAAATGCAAAACAAATGGCAGAACTGATGGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32140___pa    551 TGCAAAATGAAGAAAATCCAAATGCAAAACAAATGGCAGAACTGATGGAA    600

BSNT_04729___    601 AATAAATTCAAAAAGCAAATATAA    624
                     .|||||.|||||||||||||||||
BSU32140___pa    601 GATAAACTCAAAAAGCAAATATAA    624


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