Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04693 and BSU31900

See Amino acid alignment / Visit BSNT_04693 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence dna-align/BSNT_04693___yukD.1.22522.seq
#    -bsequence dna-align/BSU31900___yukD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04693___yukD-BSU31900___yukD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04693___yukD-BSU31900___yukD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04693___yukD
# 2: BSU31900___yukD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     239/240 (99.6%)
# Similarity:   239/240 (99.6%)
# Gaps:           0/240 ( 0.0%)
# Score: 1191.0
# 
#
#=======================================

BSNT_04693___      1 ATGTATATTGATATTACAATAGATTTGAAACATTATAACGGCAGTGTCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31900___yu      1 ATGTATATTGATATTACAATAGATTTGAAACATTATAACGGCAGTGTCTT     50

BSNT_04693___     51 TGATCTCAGATTGTCAGATTACCACCCGGTGAAAAAAGTAATTGATATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31900___yu     51 TGATCTCAGATTGTCAGATTACCACCCGGTGAAAAAAGTAATTGATATTG    100

BSNT_04693___    101 CTTGGCAGGCCCAAAGCGTATCTATGCCCCCGCGCGAAGGGCACTGGATC    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU31900___yu    101 CTTGGCAGGCCCAAAGCGTATCTATGCCTCCGCGCGAAGGGCACTGGATC    150

BSNT_04693___    151 AGAGTGGTGAACAAGGATAAGGTGTTTTCCGGAGAATGCAAGCTGTCTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31900___yu    151 AGAGTGGTGAACAAGGATAAGGTGTTTTCCGGAGAATGCAAGCTGTCTGA    200

BSNT_04693___    201 TTGCGGCATTACAAACGGAGACCGGCTTGAAATATTATGA    240
                     ||||||||||||||||||||||||||||||||||||||||
BSU31900___yu    201 TTGCGGCATTACAAACGGAGACCGGCTTGAAATATTATGA    240


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