Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04673 and BSU31770

See Amino acid alignment / Visit BSNT_04673 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:36
# Commandline: needle
#    -asequence dna-align/BSNT_04673___yueI.1.22522.seq
#    -bsequence dna-align/BSU31770___yueI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04673___yueI-BSU31770___yueI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04673___yueI-BSU31770___yueI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04673___yueI
# 2: BSU31770___yueI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity:     386/399 (96.7%)
# Similarity:   386/399 (96.7%)
# Gaps:           0/399 ( 0.0%)
# Score: 1878.0
# 
#
#=======================================

BSNT_04673___      1 TTGAGTGAAGACAAAATGGATCTCTATTTGCAGCAAGGAATGTATGGGCC     50
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU31770___yu      1 TTGAGTGAAGATAAAATGGATCTCTATTTGCAGCAAGGAATGTATGGGCC     50

BSNT_04673___     51 TTTGGAGACAAAGCCTGACGAGCGCCATTTGTTTTTAGGCTCTTTAAGAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31770___yu     51 TTTGGAGACAAAGCCTGACGAGCGCCATTTGTTTTTAGGCTCTTTAAGAG    100

BSNT_04673___    101 AAAGAGTCGTTTTGGCACTGACGAAAGGACAGGTGCTTAGAAGCAAACCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31770___yu    101 AAAGAGTCGTTTTGGCACTGACGAAAGGACAGGTGCTTAGAAGCAAACCG    150

BSNT_04673___    151 TATAAAGAGGCGGAGCACGAGCTGAAAAACAGCCATAACGTCACCCTTTT    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU31770___yu    151 TATAAAGAGGCAGAGCACGAGCTGAAAAACAGCCATAACGTCACCCTTTT    200

BSNT_04673___    201 GGTTAATGGAGAGCTTCAGTATCAGTCTTACTCTCCTTATATCCAAATGG    250
                     |.||||||||||||||||||||||||||||||||.|||||||||||||||
BSU31770___yu    201 GATTAATGGAGAGCTTCAGTATCAGTCTTACTCTTCTTATATCCAAATGG    250

BSNT_04673___    251 CGAACCGGTACGGAGTGCCCTTCAAGATTGTATCTGATCTTCAGTTTCAT    300
                     |||.|||||||||||||||.||||||||||||||||||||.|||||||||
BSU31770___yu    251 CGAGCCGGTACGGAGTGCCTTTCAAGATTGTATCTGATCTCCAGTTTCAT    300

BSNT_04673___    301 ACGCCTTTAGGCCTCGTTATTGCGGCTGACATCGCTGTGAATCGTGAATT    350
                     |||||.||||||.||||.|||||||||||.||||||||||||||||||||
BSU31770___yu    301 ACGCCCTTAGGCATCGTCATTGCGGCTGATATCGCTGTGAATCGTGAATT    350

BSNT_04673___    351 GATATATATTCAGGACGACATTTATAATCGGTCAGTGCTGAAATCTTAA    399
                     ||||||||||||||||||||||||||||||||||||.||||||||.|||
BSU31770___yu    351 GATATATATTCAGGACGACATTTATAATCGGTCAGTACTGAAATCGTAA    399


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