Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_04672 and BSU31760

See Amino acid alignment / Visit BSNT_04672 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:36
# Commandline: needle
#    -asequence dna-align/BSNT_04672___yueJ.1.22522.seq
#    -bsequence dna-align/BSU31760___pncA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04672___yueJ-BSU31760___pncA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04672___yueJ-BSU31760___pncA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04672___yueJ
# 2: BSU31760___pncA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 552
# Identity:     545/552 (98.7%)
# Similarity:   545/552 (98.7%)
# Gaps:           0/552 ( 0.0%)
# Score: 2697.0
# 
#
#=======================================

BSNT_04672___      1 ATGAAAAAAGCACTTATTTGTATTGATTATACGAATGATTTTGTGGCGAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31760___pn      1 ATGAAAAAAGCACTTATTTGTATTGATTATACGAATGATTTTGTGGCGAG     50

BSNT_04672___     51 TGACGGAAAATTGACCTGCGGGGAGCCCGGCAGAATGATTGAAGAGGCGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31760___pn     51 TGACGGAAAATTGACCTGCGGGGAGCCCGGCAGAATGATTGAAGAGGCGA    100

BSNT_04672___    101 TCGTCAATTTAACCGAAGAATTCATCACAAACGGTGATTACGTCGTATTA    150
                     |||||||||||||..|||||||||||||||||||||||||||||||||||
BSU31760___pn    101 TCGTCAATTTAACTAAAGAATTCATCACAAACGGTGATTACGTCGTATTA    150

BSNT_04672___    151 GCAGTAGATTCTCATGCTGAAGGGGATCAATATCACCCCGAAACCCGTCT    200
                     ||||||||||||||||.|||||||||||||||||||||.|||||||||||
BSU31760___pn    151 GCAGTAGATTCTCATGATGAAGGGGATCAATATCACCCTGAAACCCGTCT    200

BSNT_04672___    201 TTTTCCTCCGCATAATATAAAAGGCACGGAAGGAAAAGATCTGTACGGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31760___pn    201 TTTTCCTCCGCATAATATAAAAGGCACGGAAGGAAAAGATCTGTACGGAA    250

BSNT_04672___    251 AGCTTTTGCCTCTATATCAGAAACATGAACATGAGCCTAATGTTTACTAC    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU31760___pn    251 AGCTTTTGCCTCTATATCAGAAACATGAACATGAACCTAATGTTTACTAC    300

BSNT_04672___    301 ATGGAAAAAACGAGATATTCTGCTTTTGCGGGAACTGATTTAGAGCTCAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31760___pn    301 ATGGAAAAAACGAGATATTCTGCTTTTGCGGGAACTGATTTAGAGCTCAA    350

BSNT_04672___    351 ACTCAGAGAGCGGCAGATTGGCGAACTGCACCTTGCCGGTGTCTGCACAG    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU31760___pn    351 ACTCAGAGAGCGGCAGATTGGCGAACTGCATCTTGCCGGTGTCTGCACAG    400

BSNT_04672___    401 ATATTTGTGTGTTGCATACAGCTGTTGACGCATATAACAAAGGTTTTCGG    450
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU31760___pn    401 ATATTTGTGTGTTGCATACAGCTGTTGACGCATACAACAAAGGTTTTCGG    450

BSNT_04672___    451 ATTGTTGTGCATAAACAAGCTGTTGCCAGCTTTAATCAGGAGGGGCACGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31760___pn    451 ATTGTTGTGCATAAACAAGCTGTTGCCAGCTTTAATCAGGAGGGGCACGC    500

BSNT_04672___    501 ATGGGCTCTTTCCCATTTTGCAAACAGCATCGGAGCGCAAGTGGCAGAGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31760___pn    501 ATGGGCTCTTTCCCATTTTGCAAACAGCATCGGAGCGCAAGTGGCAGAGT    550

BSNT_04672___    551 AA    552
                     ||
BSU31760___pn    551 AA    552


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.