Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04661 and BSU31680

See Amino acid alignment / Visit BSNT_04661 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:34
# Commandline: needle
#    -asequence dna-align/BSNT_04661___comA.1.22522.seq
#    -bsequence dna-align/BSU31680___comA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04661___comA-BSU31680___comA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04661___comA-BSU31680___comA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04661___comA
# 2: BSU31680___comA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 645
# Identity:     642/645 (99.5%)
# Similarity:   642/645 (99.5%)
# Gaps:           0/645 ( 0.0%)
# Score: 3198.0
# 
#
#=======================================

BSNT_04661___      1 ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co      1 ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCAC     50

BSNT_04661___     51 CAAGACAATTTTGGAAACGGATTCGAATTTGTCTGTTGATTGTCTCAGTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co     51 CAAGACAATTTTGGAAACGGATTCGAATTTGTCTGTTGATTGTCTCAGTC    100

BSNT_04661___    101 CTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    101 CTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGAT    150

BSNT_04661___    151 CTCATTTTAATGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    151 CTCATTTTAATGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCT    200

BSNT_04661___    201 TTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATTATCGTGTATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    201 TTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATTATCGTGTATA    250

BSNT_04661___    251 CCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    251 CCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTG    300

BSNT_04661___    301 CACGGTGCCATCAGCAAAACGGAATCTAAAGAAAAGATCACCCAATACAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    301 CACGGTGCCATCAGCAAAACGGAATCTAAAGAAAAGATCACCCAATACAT    350

BSNT_04661___    351 ATACCACGTACTCAATGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC    400
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU31680___co    351 ATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC    400

BSNT_04661___    401 AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    401 AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAA    450

BSNT_04661___    451 CAAGATGTGCTCACACCTAGAGAATGCCTGATTCTTCAAGAAGTTGAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    451 CAAGATGTGCTCACACCTAGAGAATGCCTGATTCTTCAAGAAGTTGAAAA    500

BSNT_04661___    501 AGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGT    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    501 GGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGT    550

BSNT_04661___    551 CCATTGAATACAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31680___co    551 CCATTGAATACAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCA    600

BSNT_04661___    601 CGGACGGAAGCGGTTTTGATAGCGAAATCAGACGGTGTACTTTAA    645
                     ||||||||||||||||||||.||||||||||||||||||||||||
BSU31680___co    601 CGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTACTTTAA    645


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