Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04639 and BSU31490

See Amino acid alignment / Visit BSNT_04639 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:31
# Commandline: needle
#    -asequence dna-align/BSNT_04639___pbpD.1.22522.seq
#    -bsequence dna-align/BSU31490___pbpD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04639___pbpD-BSU31490___pbpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04639___pbpD-BSU31490___pbpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04639___pbpD
# 2: BSU31490___pbpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1875
# Identity:    1851/1875 (98.7%)
# Similarity:  1851/1875 (98.7%)
# Gaps:           6/1875 ( 0.3%)
# Score: 9183.0
# 
#
#=======================================

BSNT_04639___      1 ------ATGTTACGAAAAATAATCGGATGGATTTTGCTCCTTTGCATAAT     44
                           ||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb      1 GTGACCATGTTACGAAAAATAATCGGATGGATTTTGCTCCTTTGCATAAT     50

BSNT_04639___     45 CCCATTGTTTGCATTTACAGTTATCGCTTCCGGAAAAGAAGTAAAACAAA     94
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb     51 CCCATTGTTTGCATTTACAGTTATCGCTTCCGGAAAAGAAGTAAAACAAA    100

BSNT_04639___     95 TGAAGTCCCTGGATCAGGTGCTTGATAAAAATATTAATCTGAAAGATATC    144
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU31490___pb    101 TGAAGTCCCTGGATCAGGTGCTTGATAAAAATATTGATCTGAAAGATATC    150

BSNT_04639___    145 AGCCTTGTTCAGAACAGCTACATGTATGACAGGGACGGCTCCCTTGTCTC    194
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    151 AGCCTTGTTCAGAACAGCTACATGTATGACAGGGACGGCTCCCTTGTCTC    200

BSNT_04639___    195 GGAAATCGTCAGCGACCACGAAAACCGTGTGCTCGTTCCATTTAACAACA    244
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU31490___pb    201 GGAAATCGTCAGCGACCACGAAAACCGTGTGCTCGTTCCATTTAACAAGA    250

BSNT_04639___    245 TTCCCGAGGAAGTCAAACAGATTTTCTTAACATCTGAGGACCGCCATTTT    294
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    251 TTCCCGAGGAAGTCAAACAGATTTTCTTAACATCTGAGGACCGCCATTTT    300

BSNT_04639___    295 TACGAGCATAAAGGCTTTGACTTTATGGGAATGGTGCGGGCTACTGCTTC    344
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    301 TACGAGCATAAAGGCTTTGACTTTATGGGAATGGTGCGGGCTACTGCTTC    350

BSNT_04639___    345 TAACGTAAAAGACAAGAAAATTGACCAGGGTGCCAGCACCATCACACAGC    394
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    351 TAACGTAAAAGACAAGAAAATTGACCAGGGTGCCAGCACCATCACACAGC    400

BSNT_04639___    395 AGCTTTCAAGAAACTTATATTTGAGCCACGAACGCTCCTTCAGCCGCAAG    444
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU31490___pb    401 AGCTTTCAAGAAACTTGTATTTGAGCCACGAACGCTCCTTCAGCCGCAAG    450

BSNT_04639___    445 CTGACAGAGCTCGCGTATTCCTATCAGCTGGAGAAAAAATATACGAAAAA    494
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    451 CTGACAGAGCTCGCGTATTCCTATCAGCTGGAGAAAAAATATACGAAAAA    500

BSNT_04639___    495 TGAAATTCTTGAAGCTTACTTAAATACCATTTATTTTAACAATGGTGTTT    544
                     ||||||||||||||||||||||||||||||||||||.|||||.|||||||
BSU31490___pb    501 TGAAATTCTTGAAGCTTACTTAAATACCATTTATTTCAACAACGGTGTTT    550

BSNT_04639___    545 ATGGCGTCGGTTCAGCAGCTCAATTCTATTTCAGCAAACCGCTGAAATCT    594
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    551 ACGGCGTCGGTTCAGCAGCTCAATTCTATTTCAGCAAACCGCTGAAATCT    600

BSNT_04639___    595 CTCACAGTGGGAGAAATGGCTTTTATCTGTGCTATACCTAATAATCCTAC    644
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU31490___pb    601 CTCACAGTGGGAGAAATGGCTTTTATCTGTGCTATACCTAATAACCCTAC    650

BSNT_04639___    645 ATTATATGATCCTCTCAAGCATTTTGACTACACGAAAAGCCGTCAAGAAC    694
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    651 ATTATATGATCCTCTCAAGCATTTTGACTACACGAAAAGCCGTCAAGAAC    700

BSNT_04639___    695 GTTTGCTTAAAGGGCTAAAAGATGCCGGGGTCATTACGGACAAAGAGCTG    744
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    701 GTTTACTTAAAGGGCTAAAAGATGCCGGGGTCATTACGGACAAAGAGCTG    750

BSNT_04639___    745 AAAAAAGCCGTAAAACAAAAAATCAAACTGGATGTTGAAAAAAGAGAAGA    794
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    751 AAAAAAGCCGTAAAACAAAAAATCAAACTGGATGTTGAAAAAAGAGAAGA    800

BSNT_04639___    795 CAAATATCCTGACTACGTTTCCTACGTCAATGATGAATTCACTCAGCTGG    844
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    801 CAAATATCCTGACTACGTTTCCTACGTCAATGATGAATTCACTCAGCTGG    850

BSNT_04639___    845 TGTCTGAATCAGAAGGCTTTGATAAACGCCTTCAAAAAGCATCAGGAAAA    894
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    851 TGTCTGAATCAGAAGGCTTTGATAAACGCCTTCAAAAAGCATCAGGAAAA    900

BSNT_04639___    895 CAAAAAGAAAAGATCGAAAACGAGCTGTCCGCAAGAGTCAGCACGCTGAT    944
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU31490___pb    901 CAAAAAGAAAAGATCGAGAACGAGCTGTCCGCAAGAGTCAGCACGCTGAT    950

BSNT_04639___    945 GAAAGACGGCGTGAAAATTTATACTGCACTTGATCCGTACATGCAAAATC    994
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU31490___pb    951 GAAAGACGGAGTGAAAATTTATACTGCACTTGATCCGTACATGCAAAATC   1000

BSNT_04639___    995 AAGTTGTGGCACAAATGAATTCCAAGCTCCCGTATGCGGACGTACAGGGC   1044
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1001 AAGTTGTGGCACAAATGAATTCCAAGCTCCCGTATGCGGACGTACAGGGC   1050

BSNT_04639___   1045 GGAGCGGCTGTGATTAATCACCAGACGCATCAAATCATCGCTCTATCCGG   1094
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU31490___pb   1051 GGAGCGGCTGTGATTAATCACCAGACGCATCAAATCATTGCTCTATCCGG   1100

BSNT_04639___   1095 CGGGAAAAACTATCAAAAATATGACTTTAACCGCGCCTACCAGGCGTACA   1144
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1101 CGGGAAAAACTATCAAAAATATGACTTTAACCGCGCCTACCAGGCGTACA   1150

BSNT_04639___   1145 GGCAGCCGGGTTCATCCATTAAGCCGCTTCTTGATTACGGCCCTTATATT   1194
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1151 GGCAGCCGGGTTCATCCATTAAGCCGCTTCTTGATTACGGCCCTTATATT   1200

BSNT_04639___   1195 GAACAGACCGGCGCGACAGCAAGCAGCACAATTGATGCCAGCAAGTTTTG   1244
                     ||||||||||||||||||.||||||||||.||||||||||||||||||||
BSU31490___pb   1201 GAACAGACCGGCGCGACAACAAGCAGCACCATTGATGCCAGCAAGTTTTG   1250

BSNT_04639___   1245 CAGCAAAGACTACTGTCCGCAAAACTACAATAACCGCACTTACGGCACAG   1294
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1251 CAGCAAAGACTACTGTCCGCAAAACTACAATAACCGCACTTACGGCACAG   1300

BSNT_04639___   1295 TGACGCTTGATACGGCGTTTAAAAATTCATATAATACCCCGGCTATTAGA   1344
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1301 TGACGCTTGATACGGCGTTTAAAAATTCATATAATACCCCGGCTATTAGA   1350

BSNT_04639___   1345 ATGCTCGACCGCGTCGGCATCCAAAAGGCATTCAGTTATATTGAGCCGTA   1394
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1351 ATGCTCGACCGCGTCGGCATCCAAAAGGCATTCAGTTATATTGAGCCGTA   1400

BSNT_04639___   1395 TCATTTTGCCAAACTTGTCGACAGTGACTATCTTCTTCCGGCGGCGCTTG   1444
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1401 TCATTTTGCCAAACTTGTCGACAGTGACTATCTTCTTCCGGCGGCGCTTG   1450

BSNT_04639___   1445 GCGGATTTACAAACGGCATGACGCCTCTTGAGATGACAAAGGCTTATACG   1494
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1451 GCGGATTTACAAACGGCATGACGCCTCTTGAGATGACAAAGGCTTATACG   1500

BSNT_04639___   1495 ACATTCGGCAACAGCGGAAGCTATACGCCGAGCCATGCGATTACAAAGGT   1544
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1501 ACATTCGGAAACAGCGGAAGCTATACGCCGAGCCATGCGATTACAAAGGT   1550

BSNT_04639___   1545 GACAGACCTAAAAGGAAAAACGCTTTATAAATGGAATGATAAAGCGACTC   1594
                     |||||||||.|||||||||||.||||||||||||||||||||||||||||
BSU31490___pb   1551 GACAGACCTTAAAGGAAAAACACTTTATAAATGGAATGATAAAGCGACTC   1600

BSNT_04639___   1595 AAATATTCAGCGTCCGCACGAACATGCAGCTGAAAAAACTGATGTCGTCC   1644
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU31490___pb   1601 AAATATTCAGCGTCCGCACGAACATGCAGCTGAAAAAACTGATGTCTTCC   1650

BSNT_04639___   1645 GTTGTGAAAAGCGGAACAGGGAAAAAAGCATATTTCAATGCGCCTTACAT   1694
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1651 GTTGTGAAAAGCGGAACAGGGAAAAAAGCATATTTCAATGCGCCTTACAT   1700

BSNT_04639___   1695 CGGCGGTAAAACCGGAACATCAAATGATTATCACGATATGTGGTTTGTCG   1744
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1701 CGGCGGTAAAACCGGAACATCAAATGATTATCACGATATGTGGTTTGTCG   1750

BSNT_04639___   1745 GCCTGACTGATACGTATACAATGGGTGTCTGGGTCGGAAAGGACACACCG   1794
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU31490___pb   1751 GCCTGACTGATACGTATACAATGGGTGTCTGGGTCGGAAAGGATACACCG   1800

BSNT_04639___   1795 ACCAGCGTTGAATATCTTCACAGCATCAGCCCTCAGCTTTCCATCTGGAA   1844
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31490___pb   1801 ACCAGCGTTGAATATCTTCACAGCATCAGCCCTCAGCTTTCCATCTGGAA   1850

BSNT_04639___   1845 AGGAACGCTGCAAGCGGCTTATTAA   1869
                     |||||||||||||||||||||||||
BSU31490___pb   1851 AGGAACGCTGCAAGCGGCTTATTAA   1875


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