Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04638 and BSU31480

See Amino acid alignment / Visit BSNT_04638 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence dna-align/BSNT_04638.1.22522.seq
#    -bsequence dna-align/BSU31480___yuxJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04638-BSU31480___yuxJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04638-BSU31480___yuxJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04638
# 2: BSU31480___yuxJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1179
# Identity:    1050/1179 (89.1%)
# Similarity:  1050/1179 (89.1%)
# Gaps:         120/1179 (10.2%)
# Score: 5214.0
# 
#
#=======================================

BSNT_04638         0 --------------------------------------------------      0
                                                                       
BSU31480___yu      1 GTGTGGCTGGCGAACTTTTTTGTCTCCGCTAGCACAACGATGATCGTTCC     50

BSNT_04638         0 --------------------------------------------------      0
                                                                       
BSU31480___yu     51 TTTTCTCTCCTTATACATTGAGACGCTCAGCTCTTTTTCAAACGGCTTTG    100

BSNT_04638         1 --------------------GTGTTCGGCATTACATTTCTCATGGCGTTT     30
                                         ||||||||||||||||||||||||||||||
BSU31480___yu    101 TGCAAAGGTGGAGCGGCTATGTGTTCGGCATTACATTTCTCATGGCGTTT    150

BSNT_04638        31 TTGGTATCCCCGTTTTGGGGACGGTTCGGAGACAAACGCGGATACAAGAA     80
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    151 TTGGTATCCCCGTTTTGGGGACGGTTCGGAGACAAACGCGGATACAAGAA    200

BSNT_04638        81 AATCCTTATGGCAACCGGAACGGGCATTGCCCTCAGCATTTTCTTCATGG    130
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU31480___yu    201 AATCCTTATGGCAACCGGAACAGGCATTGCCCTCAGCATTTTCTTCATGG    250

BSNT_04638       131 GCTTTGTTACATCGGTGTACCAATTGTTTTTTCTGCGTATGGCAATGGGT    180
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    251 GCTTTGTTACATCGGTGTACCAATTGTTTTTTCTGCGTATGGCAATGGGT    300

BSNT_04638       181 CTTGTAACCGGATTCATCCCGACATCTCTTGCGATGATTTCGGCACAGAC    230
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    301 CTTGTAACCGGATTCATCCCGACATCTCTTGCGATGATTTCGGCACAGAC    350

BSNT_04638       231 TCCGAAGAGCTCAGCCGGCAAAACGCTTGGCACGCTGCAAATGGGGCAAG    280
                     |||||||||||||||.||||||||.||.||||||||||||||||||||||
BSU31480___yu    351 TCCGAAGAGCTCAGCTGGCAAAACACTCGGCACGCTGCAAATGGGGCAAG    400

BSNT_04638       281 TGTCCGGAAGCTTGTTCGGCCCGCTTTTGGGAGGCATGCTTGCTGATCGT    330
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    401 TGTCCGGAAGCTTGTTCGGCCCGCTTTTGGGAGGCATGCTTGCTGATCGT    450

BSNT_04638       331 TTCGGCTTTACGTATACCTTTTTTATCACATCCTTTGTAATTTTCTCGTC    380
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU31480___yu    451 TTCGGCTTTACGTATACCTTTTTTATCACATCCTTTGTGATTTTCTCGTC    500

BSNT_04638       381 TGTTCTTCTCGTGTTATTTGGTGTCAAAGAAAAGCCTCTTGCAGAGAAAA    430
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU31480___yu    501 TGTTCTTCTCGTGTTATTTGGTGTCAAAGAAAAGCATCTTGCAGAGAAAA    550

BSNT_04638       431 CAGCCAAACGTACGTCATACTCGAGAAAAGAAGTGCTCTCCTATATTTTT    480
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU31480___yu    551 CAGCCAAACGTACGTCTTACTCGAGAAAAGAAGTGCTCTCCTATATTTTT    600

BSNT_04638       481 CACCATCCGGCGCTGTGGGTCATGATGCTGTTAACCATGCTGATTCAAAC    530
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    601 CACCATCCGGCGCTGTGGGTCATGATGCTGTTAACCATGCTGATTCAAAC    650

BSNT_04638       531 AGGCAATTTCAGTATCCAGCCCCTGCTCGCTTTATATGTAAATGAGCTGC    580
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    651 AGGCAATTTCAGTATCCAGCCCCTGCTCGCTTTATATGTAAATGAGCTGC    700

BSNT_04638       581 ACGGACCTGTCAATCTTGCCTTTTTCTCCGGCATGGCATTTTCAGCAACG    630
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    701 ACGGACCTGTCAATCTTGCCTTTTTCTCCGGCATGGCATTTTCAGCAACG    750

BSNT_04638       631 GGGCTCGGAAGTTTGCTGCTGGCTAGAAAATGGGGTGATCTGGGCGACCG    680
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    751 GGGCTCGGAAGTTTGCTGCTGGCTAGAAAATGGGGTGATCTGGGCGACCG    800

BSNT_04638       681 CTACGGCCACCGCCGCATTTTAATCGGACTTTTGCTCGCCGCCTCTTTCT    730
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    801 CTACGGCCACCGCCGCATTTTAATCGGACTTTTGCTCGCCGCCTCTTTCT    850

BSNT_04638       731 TTTTTATTCCGCAGGCGCTCGCGTCCTCACTCAGCGTGCTCCTTGTTTTC    780
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    851 TTTTTATTCCGCAGGCGCTCGCGTCCTCACTCAGCGTGCTCCTTGTTTTC    900

BSNT_04638       781 AGATTTTTATTCGGAATGGCGATGGGCGGTTTGCTGCCATGCATTACGGC    830
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu    901 AGATTTTTATTCGGAATGGCGATGGGCGGTTTGCTGCCATGCATTACGGC    950

BSNT_04638       831 AGCGATCCGCGTTCAGGCTCCCGGCAGCATTCAGGGTGAAGTTCTCGGCT    880
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU31480___yu    951 AGCGATCCGCGTTCAGGCTCCCGGCAGCATTCAAGGTGAAGTTCTCGGCT   1000

BSNT_04638       881 ACAATGTCAGCTTTCGCTTTTTAGGAAACGTGCTCGGGCCTCTGCTCGGG    930
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU31480___yu   1001 ACAATGTCAGCTTTCGCTTTTTAGGAAACGTGCTCGGGCCTCTGCTCGGC   1050

BSNT_04638       931 GGAATCATATCGAGCCATTTTACCATTTCGGCCACCTTTTACGTCACGGC    980
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu   1051 GGAATCATATCGAGCCATTTTACCATTTCGGCCACCTTTTACGTCACGGC   1100

BSNT_04638       981 GTTTCTCTTTTTCGCCGGCGCCTGCATGCTTTGGATCATGCAGAAACTTC   1030
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31480___yu   1101 GTTTCTCTTTTTCGCCGGCGCCTGCATGCTTTGGATCATGCAGAAACTTC   1150

BSNT_04638      1031 GGAAAGATTCTTATGCCAAAGCAAGCTGA   1059
                     |||||||||||||||||||||||||||||
BSU31480___yu   1151 GGAAAGATTCTTATGCCAAAGCAAGCTGA   1179


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.