Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04633 and BSU31440

See Amino acid alignment / Visit BSNT_04633 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence dna-align/BSNT_04633___patB.1.22522.seq
#    -bsequence dna-align/BSU31440___patB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04633___patB-BSU31440___patB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04633___patB-BSU31440___patB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04633___patB
# 2: BSU31440___patB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1164
# Identity:    1142/1164 (98.1%)
# Similarity:  1142/1164 (98.1%)
# Gaps:           0/1164 ( 0.0%)
# Score: 5622.0
# 
#
#=======================================

BSNT_04633___      1 ATGAACTTTGATAAACGAGAAGAACGCCTTGGCACCCAATCGGTCAAATG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa      1 ATGAACTTTGATAAACGAGAAGAACGCCTTGGCACCCAATCGGTCAAATG     50

BSNT_04633___     51 GGACAAAACAGGCGAATTATTTGGCGTGACAGACGCACTCCCGATGTGGG    100
                     |||.||||||||||||||||||||||||||||||||.|||||||||||||
BSU31440___pa     51 GGATAAAACAGGCGAATTATTTGGCGTGACAGACGCCCTCCCGATGTGGG    100

BSNT_04633___    101 TGGCGGATATGGATTTTCGCGCGCCAGAAGCAATAACTGAAGCGTTAAAA    150
                     ||||.|||||||||||||||||.||.|||||.||||||||||||||||||
BSU31440___pa    101 TGGCAGATATGGATTTTCGCGCCCCGGAAGCGATAACTGAAGCGTTAAAA    150

BSNT_04633___    151 GAGCGTCTTGACCACGGTATTTTTGGTTATACAACTCCAGATCAAAAAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa    151 GAGCGTCTTGACCACGGTATTTTTGGTTATACAACTCCAGATCAAAAAAC    200

BSNT_04633___    201 GAGGGATGCTGTGTGCGGATGGATGCAAAACAGGCACGGCTGGAAGGTGA    250
                     ||.|||||||||||||||||||||||||||||||||||||||||||||.|
BSU31440___pa    201 GAAGGATGCTGTGTGCGGATGGATGCAAAACAGGCACGGCTGGAAGGTAA    250

BSNT_04633___    251 ATCCGGAAAGCATCACATTCAGCCCCGGCGTTGTAACGGCCTTGAGCATG    300
                     |||||||||||||||||||||||||||||||||||||.||.|||||||||
BSU31440___pa    251 ATCCGGAAAGCATCACATTCAGCCCCGGCGTTGTAACAGCTTTGAGCATG    300

BSNT_04633___    301 GCGGTACAAGCTTTTACGGAGCCGGGCGATCAAGTAGTTGTTCAGCCTCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa    301 GCGGTACAAGCTTTTACGGAGCCGGGCGATCAAGTAGTTGTTCAGCCTCC    350

BSNT_04633___    351 AGTTTATACGCCTTTTTACCATATGGTGGAGAAAAACGGCCGGCACATTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa    351 AGTTTATACGCCTTTTTACCATATGGTGGAGAAAAACGGCCGGCACATTT    400

BSNT_04633___    401 TACATAATCCGCTGCTAGAAGAAGACGGCGCATATGCAATGGATTTTGAA    450
                     ||||||||||||||||||||.|||||||||||||||||||.|||||||||
BSU31440___pa    401 TACATAATCCGCTGCTAGAAAAAGACGGCGCATATGCAATCGATTTTGAA    450

BSNT_04633___    451 GATTTGGAGACGAAGCTTAGTGACCCAAGCGTTACATTGTTTATTTTATG    500
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU31440___pa    451 GATTTGGAGACAAAGCTTAGTGACCCAAGCGTTACATTGTTTATTTTATG    500

BSNT_04633___    501 CAATCCTCATAACCCTTCTGGGCGTTCATGGGGCCGGGAAGATTTACTGA    550
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU31440___pa    501 CAATCCTCATAACCCTTCTGGGCGTTCATGGAGCCGGGAAGATTTACTGA    550

BSNT_04633___    551 AGCTAGGCGAATTGTGCCTTGAGCATGGCGTAACAGTTGTATCGGATGAA    600
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU31440___pa    551 AGCTAGGCGAATTGTGCCTTGAGCATGGCGTCACAGTTGTATCGGATGAA    600

BSNT_04633___    601 ATCCATTCCGATTTAATGCTGTACGGACACAAACACACGCCGTTCGCTTC    650
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU31440___pa    601 ATCCATTCCGATTTAATGCTGTACGGACATAAACACACGCCGTTCGCTTC    650

BSNT_04633___    651 GCTCTCTGACGATTTCGCTGATATTTCTGTGACATGTGCTGCTCCAAGCA    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU31440___pa    651 GCTCTCTGACGATTTCGCTGATATTTCCGTGACATGTGCTGCTCCAAGCA    700

BSNT_04633___    701 AAACATTTAATATCGCCGGATTGCAGGCTTCAGCGATCATTATTCCGGAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa    701 AAACATTTAATATCGCCGGATTGCAGGCTTCAGCGATCATTATTCCGGAT    750

BSNT_04633___    751 CGCCTGAAGCGCGCCAAGTTTTCCGCAAGCCTTCAGCGCAATGGTTTAGG    800
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU31440___pa    751 CGCCTGAAGCGCGCCAAGTTTTCCGCAAGCCTTCAGCGAAATGGTTTAGG    800

BSNT_04633___    801 CGGAATGAACGCGTTTGCCGTCACTGCAATCGAAGCCGCGTATTCAAAAG    850
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa    801 CGGACTGAACGCGTTTGCCGTCACTGCAATCGAAGCCGCGTATTCAAAAG    850

BSNT_04633___    851 GCGGACCGTGGCTTGATGAATTGATCACTTACATTGAGAAAAACATGAAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa    851 GCGGACCGTGGCTTGATGAATTGATCACTTACATTGAGAAAAACATGAAC    900

BSNT_04633___    901 GAAGCGGAAGCCTTTTTGAGCACCGAGCTGCCAAAGGTCAAAATGATGAA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa    901 GAAGCGGAAGCCTTTTTGAGCACCGAGCTGCCAAAGGTCAAAATGATGAA    950

BSNT_04633___    951 GCCGGATGCATCATACTTGATTTGGCTCGACTTCAGCGCTTACGGCTTGT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa    951 GCCGGATGCATCATACTTGATTTGGCTCGACTTCAGCGCTTACGGCTTGT   1000

BSNT_04633___   1001 CCGATACAGAGCTCCAGCAAAGAATGCTAAAAAAAGGAAAAGTTATTTTA   1050
                     |||||.|||||||.||||||||||||||||||||||||||||||||||||
BSU31440___pa   1001 CCGATGCAGAGCTTCAGCAAAGAATGCTAAAAAAAGGAAAAGTTATTTTA   1050

BSNT_04633___   1051 GAGCCCGGGACGAAATACGGGCCTGGCGGAGAAGGATTTATGCGCCTGAA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa   1051 GAGCCCGGGACGAAATACGGGCCTGGCGGAGAAGGATTTATGCGCCTGAA   1100

BSNT_04633___   1101 CGCGGGATGCTCTCTTGCAACCCTGCAGGACGGCCTGCGCCGCATCAAAG   1150
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU31440___pa   1101 CGCCGGATGCTCTCTTGCAACCCTGCAGGACGGCCTGCGCCGCATCAAAG   1150

BSNT_04633___   1151 CCGCATTATCGTAA   1164
                     ||||||||||||||
BSU31440___pa   1151 CCGCATTATCGTAA   1164


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