Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04601 and BSU31279

See Amino acid alignment / Visit BSNT_04601 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:26
# Commandline: needle
#    -asequence dna-align/BSNT_04601.1.22522.seq
#    -bsequence dna-align/BSU31279___yuzH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04601-BSU31279___yuzH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04601-BSU31279___yuzH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04601
# 2: BSU31279___yuzH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     253/255 (99.2%)
# Similarity:   253/255 (99.2%)
# Gaps:           0/255 ( 0.0%)
# Score: 1257.0
# 
#
#=======================================

BSNT_04601         1 ATGAACATTCTTCAATATTCTTATAAAAAAAGAGGGAAAATTGAGTTTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31279___yu      1 ATGAACATTCTTCAATATTCTTATAAAAAAAGAGGGAAAATTGAGTTTGT     50

BSNT_04601        51 ATTTGAAGGCTGGCCTCACTCAAAAGTTACAATGGTTCCTATCAAAGGCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31279___yu     51 ATTTGAAGGCTGGCCTCACTCAAAAGTTACAATGGTTCCTATCAAAGGCT    100

BSNT_04601       101 ACTATTTTGTCCGCTTTATCAAATGGAGCAGCCAGGATCCAATCGTGACA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31279___yu    101 ACTATTTTGTCCGCTTTATCAAATGGAGCAGCCAGGATCCAATCGTGACA    150

BSNT_04601       151 AGAAATGACCTTGAAAAAATGGAGTGGGCTGCGAACCAATATTTCGGCAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU31279___yu    151 AGAAATGACCTTGAAAAAATGGAGTGGGCTGCGAACCAATATTTTGGCAC    200

BSNT_04601       201 AGCCCCCTTCTATCGAAAACGAAAGGCATTTGAAACCCCATCGTCCCGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU31279___yu    201 AGCCCCCTTCTATCGAAAACGAAAGGCATTTGAAACCCCATCGTCCGGAA    250

BSNT_04601       251 AATAG    255
                     |||||
BSU31279___yu    251 AATAG    255


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