Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04596 and BSU31240

See Amino acid alignment / Visit BSNT_04596 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:25
# Commandline: needle
#    -asequence dna-align/BSNT_04596___mcpA.1.22522.seq
#    -bsequence dna-align/BSU31240___mcpA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04596___mcpA-BSU31240___mcpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04596___mcpA-BSU31240___mcpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04596___mcpA
# 2: BSU31240___mcpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1989
# Identity:    1967/1989 (98.9%)
# Similarity:  1967/1989 (98.9%)
# Gaps:           3/1989 ( 0.2%)
# Score: 9759.0
# 
#
#=======================================

BSNT_04596___      1 ATGATGAAAAAAATACTCCAACTCATAAAACAAAGATCAATTACACGGAA     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc      1 ---ATGAAAAAAATACTCCAACTCATAAAACAAAGATCAATTACACGGAA     47

BSNT_04596___     51 GCTTCTCGTTTCCTTTCTGTCGATCCTCATCATACCGGTTGTTATATTGG    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU31240___mc     48 GCTTCTCGTTTCCTTTCTGTCGATCCTCATCATACCGGTTGTCATATTGG     97

BSNT_04596___    101 CGATCTTTGCCTATCAATCGGCTAGCAGCTCACTCGACAGACAGATGATG    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU31240___mc     98 CGATCTTTGCGTATCAATCGGCTAGCAGCTCACTCGACAGACAGATGATG    147

BSNT_04596___    151 GGGAGCGCATTGGAAAATGTACAGCAATTAAACGAAATCATTAACACCAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    148 GGGAGCGCATTGGAAAATGTACAGCAATTAAACGAAATCATTAACACCAG    197

BSNT_04596___    201 CATCGGCGAAAAAGAAAACAGTGCTGATTATTTCAGCGAATGGCTGACAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    198 CATCGGCGAAAAAGAAAACAGTGCTGATTATTTCAGCGAATGGCTGACAA    247

BSNT_04596___    251 AAGAGAAATACAATGCAAAAAGCAATGCAAGCATTGCAGAGAAATTCTCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    248 AAGAGAAATACAATGCAAAAAGCAATGCAAGCATTGCAGAGAAATTCTCA    297

BSNT_04596___    301 CAATATATCAGCATTAACAAGGATGTAGAATCCATTTATACAAGTGACAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    298 CAATATATCAGCATTAACAAGGATGTAGAATCCATTTATACAAGTGACAC    347

BSNT_04596___    351 AAAAGGGCACTTTACCCGCTATCCGGATCTTCCGATGCCAAGTGGCTATA    400
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU31240___mc    348 AAAAGGGCACTTTACCCGCTATCCGGATCTTCCGATGCCAAGCGGCTATA    397

BSNT_04596___    401 ATCCGGTTGAACGCGACTGGTACAAAAAAGCGGTTGCAAATAAAGGGAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    398 ATCCGGTTGAACGCGACTGGTACAAAAAAGCGGTTGCAAATAAAGGGAAA    447

BSNT_04596___    451 GTCGTGATCACAGACCCTTATAAAACCGCGTCGACAAATACGATGGTTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    448 GTCGTGATCACAGACCCTTATAAAACCGCGTCGACAAATACGATGGTTGT    497

BSNT_04596___    501 GACAATCGCCCAGCAGACAAAAGATGGTTCAGGCGTTATCGCAATCAACA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    498 GACAATCGCCCAGCAGACAAAAGATGGTTCAGGCGTTATCGCAATCAACA    547

BSNT_04596___    551 TGACGATTGAAAATCTGCTGAAAACAACCAAAAAAGTCAACATCGGCACA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    548 TGACGATTGAAAATCTGCTGAAAACAACCAAAAAAGTCAACATCGGCACA    597

BSNT_04596___    601 CAAGGCTACGCATTTATCATGACGAAGGACAAAAAAGTTGTCGCACACCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    598 CAAGGCTACGCATTTATCATGACGAAGGACAAAAAAGTTGTCGCACACCC    647

BSNT_04596___    651 GAATGAAAAATCAGGAACTGAATTAAAAGGCGACTGGCTCGATAAGATGT    700
                     .||||||.||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    648 TAATGAACAATCAGGAACTGAATTAAAAGGCGACTGGCTCGATAAGATGT    697

BSNT_04596___    701 TGAGTGCTGATAAAGGCGATTTTCAATACACCATGGATGGCGATAAGAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    698 TGAGTGCTGATAAAGGCGATTTTCAATACACCATGGATGGCGATAAGAAA    747

BSNT_04596___    751 AAAATGGCCTTTGACACAAACAAGTTGACGGGATGGAAGATCGGCGGCAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    748 AAAATGGCCTTTGACACAAACAAGTTGACGGGATGGAAGATCGGCGGCAC    797

BSNT_04596___    801 CATGTATTTGGATGAAATCCATGAGGCAGCCCAGCCTGTCCTTCACCTTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    798 CATGTATTTGGATGAAATCCATGAGGCAGCCCAGCCTGTCCTTCACCTTG    847

BSNT_04596___    851 CTTTAATTGTCTTGGCCGCAGCTATTATCATAGGGATTATCGTCATGACT    900
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU31240___mc    848 CTTTAATTGTCTTGGCCGCAGCTATTATCATAGGGATTATCGTCATGACA    897

BSNT_04596___    901 TTGATCATTCGGTCGATTACAACACCGCTGAAACAGCTTGTCGGTTCCTC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    898 TTGATCATTCGGTCGATTACAACACCGCTGAAACAGCTTGTCGGTTCCTC    947

BSNT_04596___    951 TAAGCGGATCAGCGAGGGAGATTTGACGGAAACCATTGATATCCGTTCAA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc    948 TAAGCGGATCAGCGAGGGAGATTTGACGGAAACCATTGATATCCGTTCAA    997

BSNT_04596___   1001 AAGATGAATTGGGCGAGCTTGGCAAAAGCTTTAACAATATGGCTTCGTCA   1050
                     |||||||||||||||||||.|||||||||||||||||||||||.||||||
BSU31240___mc    998 AAGATGAATTGGGCGAGCTCGGCAAAAGCTTTAACAATATGGCGTCGTCA   1047

BSNT_04596___   1051 CTTCGTTCTCTCATACACGCCATCCAGGATTCCGTAGATAATGTTGCCGC   1100
                     ||||||||||||||||||||||||||||||||.|||||.|||||||||||
BSU31240___mc   1048 CTTCGTTCTCTCATACACGCCATCCAGGATTCGGTAGACAATGTTGCCGC   1097

BSNT_04596___   1101 TTCCTCTGAGGAGCTCACTGCATCAGCTGCGCAAACGAGCAAGGCAACAG   1150
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU31240___mc   1098 TTCCTCTGAGGAGCTGACTGCATCAGCTGCGCAAACGAGCAAGGCAACAG   1147

BSNT_04596___   1151 AGCACATTACATTGGCGATTGAACAATTTTCTAACGGCAATGAAAAACAA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1148 AGCACATTACATTGGCGATTGAACAATTTTCTAACGGCAATGAAAAACAA   1197

BSNT_04596___   1201 AACGAAAACATTGAAACGGCAGCAGAGCACATTTATCAAATGAATGACGG   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1198 AACGAAAACATTGAAACGGCAGCAGAGCACATTTATCAAATGAATGACGG   1247

BSNT_04596___   1251 GTTGACGAATATGGCTCAAGCTTCTGAAGTGATCACTGATTCATCTGTTC   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1248 GTTGACGAATATGGCTCAAGCTTCTGAAGTGATCACTGATTCATCTGTTC   1297

BSNT_04596___   1301 AATCGACAGAAATTGCAAGTGAAGGCGGCAAGCTTGTTCATCAAACCATC   1350
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU31240___mc   1298 AATCGACAGAAATTGCAAGTGAAGGCGGCAAGCTTGTTCATCAAACCGTC   1347

BSNT_04596___   1351 GGCCAAATGAATGTCATTGACAAGTCCGTTAAAGAAGCGGAGCAAGTCGT   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1348 GGCCAAATGAATGTCATTGACAAGTCCGTTAAAGAAGCGGAGCAAGTCGT   1397

BSNT_04596___   1401 ACGCGGATTGGAAACGAAATCGAAAGATATTACAAACATTTTGCGTGTGA   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1398 ACGCGGATTGGAAACGAAATCGAAAGATATTACAAACATTTTGCGTGTGA   1447

BSNT_04596___   1451 TCAACGGCATCGCAGACCAGACGAACCTGCTTGCCTTAAACGCAGCAATT   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1448 TCAACGGCATCGCAGACCAGACGAACCTGCTTGCCTTAAACGCAGCAATT   1497

BSNT_04596___   1501 GAAGCAGCGCGCGCAGGCGAGTACGGCCGCGGCTTCTCCGTTGTAGCGGA   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1498 GAAGCAGCGCGCGCAGGCGAGTACGGCCGCGGCTTCTCCGTTGTAGCGGA   1547

BSNT_04596___   1551 AGAAGTAAGAAAACTGGCAGTACAGTCAGCAGATTCAGCAAAAGAGATTG   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1548 AGAAGTAAGAAAACTGGCAGTACAGTCAGCAGATTCAGCAAAAGAGATTG   1597

BSNT_04596___   1601 AAGGATTAATCATCGAAATTGTGAAGGAAATCAATACATCACTCGGCATG   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1598 AAGGATTAATCATCGAAATTGTGAAGGAAATCAATACATCACTCGGCATG   1647

BSNT_04596___   1651 TTCCAATCTGTCAATCAAGAGGTGCAGACAGGACTTGACATCACAGATAA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1648 TTCCAATCTGTCAATCAAGAGGTGCAGACAGGACTTGACATCACAGATAA   1697

BSNT_04596___   1701 AACAGAAATGAGCTTCAAACGCATTTCTGAAATGACGAACCAAATCGCCG   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1698 AACAGAAATGAGCTTCAAACGCATTTCTGAAATGACGAACCAAATCGCCG   1747

BSNT_04596___   1751 GCGAACTGCAAAATATGAGTGCGACGGTTCAGCAGCTTTCTGCCAGCTCC   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1748 GCGAACTGCAAAATATGAGTGCGACGGTTCAGCAGCTTTCTGCCAGCTCC   1797

BSNT_04596___   1801 GAAGAAGTTTCGGGAGCGTCTGAGCACATTGCATCGATTTCAAAAGAAAG   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31240___mc   1798 GAAGAAGTTTCGGGAGCGTCTGAGCACATTGCATCGATTTCAAAAGAAAG   1847

BSNT_04596___   1851 TTCAGCGCATATACAAGATATCGCGGCGTCAGCCGAAGAGCAGCTTGCTT   1900
                     .||||||||||||||||||||||||||||||||.|||||||||||.||||
BSU31240___mc   1848 CTCAGCGCATATACAAGATATCGCGGCGTCAGCTGAAGAGCAGCTAGCTT   1897

BSNT_04596___   1901 CCATGGAAGAAATCAGCTCGTCTGCAGAGACCCTTTCGTCTATGGCGGAA   1950
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU31240___mc   1898 CCATGGAAGAAATCAGCTCGTCTGCAGAGACCCTTTCCTCTATGGCGGAA   1947

BSNT_04596___   1951 GAGCTTCGCGATATGACCAAACGATTCAAAATCGAATAA   1989
                     ||||||||.|||||||||||||||||.|||||.||||||
BSU31240___mc   1948 GAGCTTCGGGATATGACCAAACGATTTAAAATTGAATAA   1986


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.