Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04587 and BSU31190

See Amino acid alignment / Visit BSNT_04587 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence dna-align/BSNT_04587___yulD.1.22522.seq
#    -bsequence dna-align/BSU31190___yulD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04587___yulD-BSU31190___yulD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04587___yulD-BSU31190___yulD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04587___yulD
# 2: BSU31190___yulD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     312/315 (99.0%)
# Similarity:   312/315 (99.0%)
# Gaps:           0/315 ( 0.0%)
# Score: 1548.0
# 
#
#=======================================

BSNT_04587___      1 TTGAAAAGAAAAGCCAGTATCATGTTTGTCCATCAAGACAAGTACGAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31190___yu      1 TTGAAAAGAAAAGCCAGTATCATGTTTGTCCATCAAGACAAGTACGAAGA     50

BSNT_04587___     51 ATACAAACAGCGGCATGATGACATTTGGCCTGAGATGGCAGAAGCACTCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31190___yu     51 ATACAAACAGCGGCATGATGACATTTGGCCTGAGATGGCAGAAGCACTCA    100

BSNT_04587___    101 AAGCTCATGGAGCACACCATTATTCCATTTTTCTAGACGAGGAAACAGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31190___yu    101 AAGCTCATGGAGCACACCATTATTCCATTTTTCTAGACGAGGAAACAGGC    150

BSNT_04587___    151 AGGCTTTTTGCATATTTAGAAATAGAGGATGAAGAGAAATGGAGAAAGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31190___yu    151 AGGCTTTTTGCATATTTAGAAATAGAGGATGAAGAGAAATGGAGAAAGAT    200

BSNT_04587___    201 GGCGGACACGGAAGTTTGCCGAAGATGGTGGAAATCGATGGCGCCATTAA    250
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU31190___yu    201 GGCGGACACGGAAGTTTGCCAAAGATGGTGGAAATCGATGGCGCCATTAA    250

BSNT_04587___    251 TGAAAACAAATTCGGATTTCAGTCCTGTTTCGATAGATCTAAAGGAAGTT    300
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU31190___yu    251 TGAAAACAAATTCGGATTTCAGTCCTGTTGCGATAGATCTAAAGGAAGTT    300

BSNT_04587___    301 TTTTATTTGGATTAA    315
                     |||||||||||||.|
BSU31190___yu    301 TTTTATTTGGATTGA    315


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