Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04581 and BSU31150

See Amino acid alignment / Visit BSNT_04581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence dna-align/BSNT_04581___uppP.1.22522.seq
#    -bsequence dna-align/BSU31150___yubB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04581___uppP-BSU31150___yubB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04581___uppP-BSU31150___yubB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04581___uppP
# 2: BSU31150___yubB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 831
# Identity:     821/831 (98.8%)
# Similarity:   821/831 (98.8%)
# Gaps:           0/831 ( 0.0%)
# Score: 4065.0
# 
#
#=======================================

BSNT_04581___      1 ATGACTCTATGGGAATTGTTTGTAGCCGCCATTTTAGGAATCGTAGAAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu      1 ATGACTCTATGGGAATTGTTTGTAGCCGCCATTTTAGGAATCGTAGAAGG     50

BSNT_04581___     51 ATTAACAGAGTACGCGCCGGTTTCTTCGACAGGACATATGATTATAGTAG    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU31150___yu     51 ATTAACAGAGTACGCGCCGGTTTCTTCGACAGGACATATGATCATAGTAG    100

BSNT_04581___    101 ACGACATCTGGCTTAAATCAAGTAATCTGATGTCAGAAGAAGCTGCTAAC    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU31150___yu    101 ACGACATCTGGCTAAAATCAAGTAATCTGATGTCAGAAGAAGCTGCTAAC    150

BSNT_04581___    151 TCATTCAAGGTGGTTATTCAGCTAGGCTCCATTTTAGCAGTAGCTATCGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    151 TCATTCAAGGTGGTTATTCAGCTAGGCTCCATTTTAGCAGTAGCTATCGT    200

BSNT_04581___    201 GTTTAAAGACCGAATTTTAAATTTACTGGGCTTGAAAAAAAATATTACAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    201 GTTTAAAGACCGAATTTTAAATTTACTGGGCTTGAAAAAAAATATTACAA    250

BSNT_04581___    251 GCGACCAGGAGCAGGGACATAAATTAAGCATTGCCCAAATTGCCGTCGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    251 GCGACCAGGAGCAGGGACATAAATTAAGCATTGCCCAAATTGCCGTCGGA    300

BSNT_04581___    301 CTCGTGCCTGCAGCTGTTCTCGGCTTTTTGTTTGAAGATTACATTGATGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    301 CTCGTGCCTGCAGCTGTTCTCGGCTTTTTGTTTGAAGATTACATTGATGA    350

BSNT_04581___    351 ATATTTATTTTCCGTTAAAACTGTGGCCATCGGTTTAATTGCCGGGGCAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    351 ATATTTATTTTCCGTTAAAACTGTGGCCATCGGTTTAATTGCCGGGGCAA    400

BSNT_04581___    401 TCCTCATGCTTTTTGCTGACTGGGTCAATAAACGGAAAACAGCGACAGAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    401 TCCTCATGCTTTTTGCTGACTGGGTCAATAAACGGAAAACAGCGACAGAC    450

BSNT_04581___    451 ACACTCGACCGCATTTCCTATAAACAGGCGATAGCCGTCGGCTTATTCCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    451 ACACTCGACCGCATTTCCTATAAACAGGCGATAGCCGTCGGCTTATTCCA    500

BSNT_04581___    501 ATGTCTTGCCCTTTGGCCGGGTTTCTCGCGTTCTGGTTCAACCATATCCG    550
                     |||||||.||||||||||.||||||||||||||.|||||||||||.||||
BSU31150___yu    501 ATGTCTTTCCCTTTGGCCTGGTTTCTCGCGTTCGGGTTCAACCATTTCCG    550

BSNT_04581___    551 GAGGTGTTATTCTCGGATTAAACCACCGAGCTGCAGCCGACTTTACGTTT    600
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    551 GCGGTGTTATTCTCGGATTAAACCACCGAGCTGCAGCCGACTTTACGTTT    600

BSNT_04581___    601 ATTATGGCGATGCCGATCATGATGGGAGCCAGCTTTCTAAGCCTCGTGAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    601 ATTATGGCGATGCCGATCATGATGGGAGCCAGCTTTCTAAGCCTCGTGAA    650

BSNT_04581___    651 GCATTGGGACAGCTTAAGCTCGGATCTGATGCCATTTTTCATCGTCGGCT    700
                     ||||||||||||||||||.||||||||||||||.||||||||||||||||
BSU31150___yu    651 GCATTGGGACAGCTTAAGTTCGGATCTGATGCCGTTTTTCATCGTCGGCT    700

BSNT_04581___    701 TTATCTGTGCCTTTGTTGTCGCACTGTTTGTCGTCCGTTTCTTCTTAAGG    750
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU31150___yu    701 TTATCTGTGCCTTTGTGGTCGCACTGTTTGTCGTCCGTTTCTTCTTAAGG    750

BSNT_04581___    751 CTGATTAACAAAATCAAACTTGTCCCATTTGCAATCTATCGAATTATTCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31150___yu    751 CTGATTAACAAAATCAAACTTGTCCCATTTGCAATCTATCGAATTATTCT    800

BSNT_04581___    801 CGGTGTGATTTTACTTTTGATCATGATGTAA    831
                     |||||||||||||||||||||||||||||||
BSU31150___yu    801 CGGTGTGATTTTACTTTTGATCATGATGTAA    831


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