Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04569 and BSU31080

See Amino acid alignment / Visit BSNT_04569 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence dna-align/BSNT_04569___yuaB.1.22522.seq
#    -bsequence dna-align/BSU31080___yuaB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04569___yuaB-BSU31080___yuaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04569___yuaB-BSU31080___yuaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04569___yuaB
# 2: BSU31080___yuaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity:     541/546 (99.1%)
# Similarity:   541/546 (99.1%)
# Gaps:           0/546 ( 0.0%)
# Score: 2685.0
# 
#
#=======================================

BSNT_04569___      1 ATGAAACGCAAATTATTATCTTCTTTGGCAATTAGTGCATTAAGTCTCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31080___yu      1 ATGAAACGCAAATTATTATCTTCTTTGGCAATTAGTGCATTAAGTCTCGG     50

BSNT_04569___     51 GTTACTCGTTTCTGCACCTACAGCTTCTTTCGCGGCTGAATCTACATCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31080___yu     51 GTTACTCGTTTCTGCACCTACAGCTTCTTTCGCGGCTGAATCTACATCAA    100

BSNT_04569___    101 CTAAAGCTCATACTGAATCTACTATGAGAACACAGTCTACAGCTTCATTG    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU31080___yu    101 CTAAAGCTCATACTGAATCCACTATGAGAACACAGTCTACAGCTTCATTG    150

BSNT_04569___    151 TTCGCAACAATCACTGGCGCCAGCAAAACGGAATGGTCTTTCTCAGATAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31080___yu    151 TTCGCAACAATCACTGGCGCCAGCAAAACGGAATGGTCTTTCTCAGATAT    200

BSNT_04569___    201 CGAATTGACTTACCGTCCAAACACGCTTCTCAGCCTTGGCGTTATGGAGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31080___yu    201 CGAATTGACTTACCGTCCAAACACGCTTCTCAGCCTTGGCGTTATGGAGT    250

BSNT_04569___    251 TTACATTGCCAAGCGGATTTACTGCAAACACGAAAGACACACTGAACGGA    300
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU31080___yu    251 TTACATTGCCAAGCGGATTTACTGCAAACACGAAAGACACATTGAACGGA    300

BSNT_04569___    301 AATGCCTTGCGTACAACACAGATCCTCAATAACGGGAAAACAGTAAGAGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31080___yu    301 AATGCCTTGCGTACAACACAGATCCTCAATAACGGGAAAACAGTAAGAGT    350

BSNT_04569___    351 TCCTTTGGCACTTGATTTGTTAGGAGCTGGCGAATTTAAATTAAAACTGA    400
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU31080___yu    351 TCCTTTGGCACTTGATTTGTTAGGAGCTGGCGAATTCAAATTAAAACTGA    400

BSNT_04569___    401 ATAACAAAACACTTCCTGCCGCTGGTACATACACTTTCCGTGCAGAGAAT    450
                     |||||||||||||||||||||||||||||||.|||||||||||.||||||
BSU31080___yu    401 ATAACAAAACACTTCCTGCCGCTGGTACATATACTTTCCGTGCGGAGAAT    450

BSNT_04569___    451 AAATCATTAAGCATCGGAAATAAATTTTACGCAGAAGCCAGCATTGACGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31080___yu    451 AAATCATTAAGCATCGGAAATAAATTTTACGCAGAAGCCAGCATTGACGT    500

BSNT_04569___    501 GGCTAAGCGCAGCACTCCTCCGACTCAGCCTTGCGGTTGCAACTAA    546
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU31080___yu    501 GGCTAAGCGCAGCACTCCTCCGACTCAGCCTTGCGGTTGCAACTAA    546


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