Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04568 and BSU31070

See Amino acid alignment / Visit BSNT_04568 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence dna-align/BSNT_04568___yuaC.1.22522.seq
#    -bsequence dna-align/BSU31070___yuaC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04568___yuaC-BSU31070___yuaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04568___yuaC-BSU31070___yuaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04568___yuaC
# 2: BSU31070___yuaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity:     539/543 (99.3%)
# Similarity:   539/543 (99.3%)
# Gaps:           0/543 ( 0.0%)
# Score: 2679.0
# 
#
#=======================================

BSNT_04568___      1 ATGGATGAAAATCCAGAATTTGCAGCTATAGAACAGGCTCGGGATCTTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31070___yu      1 ATGGATGAAAATCCAGAATTTGCAGCTATAGAACAGGCTCGGGATCTTGT     50

BSNT_04568___     51 TATTGACTCCATTGCTGAAACGATGGATCTTTACGGAATTACCCGCAGTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31070___yu     51 TATTGACTCCATTGCTGAAACGATGGATCTTTACGGAATTACCCGCAGTG    100

BSNT_04568___    101 TCGGGATTTTATATGGGACGATGTATATGAGGGATGAGATGACGCTTGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31070___yu    101 TCGGGATTTTATATGGGACGATGTATATGAGGGATGAGATGACGCTTGAC    150

BSNT_04568___    151 GAAATGCGTGAGGAGTTGCAAATGAGCAAACCAAGCATGAGCACAGGCGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU31070___yu    151 GAAATGCGTGAGGAGTTGCAAATGAGCAAACCAAGCATGAGCACTGGCGT    200

BSNT_04568___    201 CAAAAAGCTTCAAGACTTAAATGTAGTGAAAAAAACATTTCACCGGGGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31070___yu    201 CAAAAAGCTTCAAGACTTAAATGTAGTGAAAAAAACATTTCACCGGGGCA    250

BSNT_04568___    251 TCCGTAAGCATACATTTGTGGCTGAGAAGGATTTCTTTAAATTTTTCACA    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU31070___yu    251 TCCGCAAGCATACATTTGTGGCTGAGAAGGATTTCTTTAAATTTTTCACA    300

BSNT_04568___    301 AATTTCTTTCCACCTAAATGGGAGCGGGAGGTTCAAGTGAATGTAGCAGC    350
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU31070___yu    301 AATTTCTTTCCACCTAAATGGGAGCGGGAGGTTCAAGTGAATGTAACAGC    350

BSNT_04568___    351 GATCGAGGAAGCTCAAGCTGATTTACAAAAGGTTTTATGCAAGGAAGATC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31070___yu    351 GATCGAGGAAGCTCAAGCTGATTTACAAAAGGTTTTATGCAAGGAAGATC    400

BSNT_04568___    401 TCGATGAGGATATCAAAAATGAAGCACTGCAGTTATATGATCAGCTGGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31070___yu    401 TCGATGAGGATATCAAAAATGAAGCACTGCAGTTATATGATCAGCTGGAA    450

BSNT_04568___    451 AGCTCTAAAGCTTACTATGACTGGCTGAAACGGCTTGCTGAATCGGTGCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31070___yu    451 AGCTCTAAAGCTTACTATGACTGGCTGAAACGGCTTGCTGAATCGGTGCA    500

BSNT_04568___    501 GACCGGAGAAATTTTTAAATTTATACCGATCGAAACAAAGTAA    543
                     ||||||||||||||||||||||||||||.||||||||||||||
BSU31070___yu    501 GACCGGAGAAATTTTTAAATTTATACCGGTCGAAACAAAGTAA    543


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