Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04560 and BSU31020

See Amino acid alignment / Visit BSNT_04560 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence dna-align/BSNT_04560___yuaF.1.22522.seq
#    -bsequence dna-align/BSU31020___yuaF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04560___yuaF-BSU31020___yuaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04560___yuaF-BSU31020___yuaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04560___yuaF
# 2: BSU31020___yuaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 576
# Identity:     519/576 (90.1%)
# Similarity:   519/576 (90.1%)
# Gaps:          51/576 ( 8.9%)
# Score: 2571.0
# 
#
#=======================================

BSNT_04560___      1 ATGGTAACGGCGGCCGTTCATCAATGCATTGATGAAGAAAGGATGAGGAA     50
                                                                       
BSU31020___yu      0 --------------------------------------------------      0

BSNT_04560___     51 ATTGGAGTTATTTGGAGTACCTATACAAACAATTTATCTTTATACGCTTA    100
                      ||||||||||||||||||||||||||||||||.||||||||||||||||
BSU31020___yu      1 -TTGGAGTTATTTGGAGTACCTATACAAACAATGTATCTTTATACGCTTA     49

BSNT_04560___    101 TTATTGCGGGCAGCCTTACGCTGTTATTCCTGTTTTTCGGAGATGTATTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu     50 TTATTGCGGGCAGCCTTACGCTGTTATTCCTGTTTTTCGGAGATGTATTT     99

BSNT_04560___    151 GCAGGGCTGTCAGAAGGCATTCCGTTTCTTAATCCGACATTAGTGCTCTC    200
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu    100 TCAGGGCTGTCAGAAGGCATTCCGTTTCTTAATCCGACATTAGTGCTCTC    149

BSNT_04560___    201 ATTTTTCACATGTTTTTCAGCGGGCGGATATATAGGTGAACTCGTATTGC    250
                     ||||||.|||||||||||||||||||||||||||||||||||.|||||||
BSU31020___yu    150 ATTTTTTACATGTTTTTCAGCGGGCGGATATATAGGTGAACTTGTATTGC    199

BSNT_04560___    251 CTCTGTCAAGCTTGCTGATTGCGCTTTTATCTTGCATCCTTTCGATCATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu    200 CTCTGTCAAGCTTGCTGATTGCGCTTTTATCTTGCATCCTTTCGATCATG    249

BSNT_04560___    301 CTGGTGGTATTGCTTCACATCTTTGTGCTGGTGCCATTATCATCTGCAGA    350
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU31020___yu    250 CTGGTGGTATTGCTTCACATCTTTGTACTGGTGCCATTATCATCTGCAGA    299

BSNT_04560___    351 AGAATCATTGGCATATAGAGAAGATGATCTCAGAGGAAGACTCGGTAAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu    300 AGAATCATTGGCATATAGAGAAGATGATCTCAGAGGAAGACTCGGTAAAG    349

BSNT_04560___    401 TGATTACAGCTGTGCCGGTTGACGGATTTGGTGAAGTGGTCATAGAAGGG    450
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU31020___yu    350 TGATTACAGCTGTGCCGGTTGACGGGTTTGGTGAAGTGGTCATAGAAGGG    399

BSNT_04560___    451 ATAGGCGGGACCATTTCAAAGTCAGCGGTCAGTTTTGATAATCAGCAGAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu    400 ATAGGCGGGACCATTTCAAAGTCAGCGGTCAGTTTTGATAATCAGCAGAT    449

BSNT_04560___    501 CAGTTACGGGACAACGGTGTTAGTCGTAGATATTAACAACGGAGTTCTTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31020___yu    450 CAGTTACGGGACAACGGTGTTAGTCGTAGATATTAACAACGGAGTTCTTT    499

BSNT_04560___    551 CGGTTACTCCGCATGAACCCATTTAA    576
                     ||||||||||||||||||||||||||
BSU31020___yu    500 CGGTTACTCCGCATGAACCCATTTAA    525


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