Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04557 and BSU30990

See Amino acid alignment / Visit BSNT_04557 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence dna-align/BSNT_04557___yuaJ.1.22522.seq
#    -bsequence dna-align/BSU30990___thiT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04557___yuaJ-BSU30990___thiT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04557___yuaJ-BSU30990___thiT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04557___yuaJ
# 2: BSU30990___thiT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity:     579/579 (100.0%)
# Similarity:   579/579 (100.0%)
# Gaps:           0/579 ( 0.0%)
# Score: 2895.0
# 
#
#=======================================

BSNT_04557___      1 ATGAATCAATCTAAGCAACTGGTTCGCCTTATTGAAATTGCCATTATGAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th      1 ATGAATCAATCTAAGCAACTGGTTCGCCTTATTGAAATTGCCATTATGAC     50

BSNT_04557___     51 AGCGGCAGCCGTTATTTTAGACATTGTCTCAGGAATGTTTCTTAGCATGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th     51 AGCGGCAGCCGTTATTTTAGACATTGTCTCAGGAATGTTTCTTAGCATGC    100

BSNT_04557___    101 CTCAAGGAGGCTCGGTCTCCATCATGATGATTCCGATCTTTTTAATTTCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    101 CTCAAGGAGGCTCGGTCTCCATCATGATGATTCCGATCTTTTTAATTTCG    150

BSNT_04557___    151 TTTCGCTGGGGTGTCAAAGCAGGTCTTACTACAGGTTTGTTGACAGGTCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    151 TTTCGCTGGGGTGTCAAAGCAGGTCTTACTACAGGTTTGTTGACAGGTCT    200

BSNT_04557___    201 AGTACAAATAGCAATCGGAAACTTGTTTGCTCAACATCCTGTACAGCTAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    201 AGTACAAATAGCAATCGGAAACTTGTTTGCTCAACATCCTGTACAGCTAT    250

BSNT_04557___    251 TGTTAGATTACATTGTCGCTTTCGCAGCAATCGGCATAAGCGGCTGTTTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    251 TGTTAGATTACATTGTCGCTTTCGCAGCAATCGGCATAAGCGGCTGTTTC    300

BSNT_04557___    301 GCTTCTTCTGTCCGTAAAGCCGCTGTATCAAAAACAAAAGGGAAATTGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    301 GCTTCTTCTGTCCGTAAAGCCGCTGTATCAAAAACAAAAGGGAAATTGAT    350

BSNT_04557___    351 TGTTTCAGTGGTCAGCGCAGTTTTTATCGGCAGTTTGCTGCGCTATGCCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    351 TGTTTCAGTGGTCAGCGCAGTTTTTATCGGCAGTTTGCTGCGCTATGCCG    400

BSNT_04557___    401 CGCATGTCATTTCAGGAGCTGTGTTTTTCGGCAGCTTTGCTCCAAAAGGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    401 CGCATGTCATTTCAGGAGCTGTGTTTTTCGGCAGCTTTGCTCCAAAAGGA    450

BSNT_04557___    451 ACACCGGTATGGATTTATTCTTTAACTTATAATGCGACTTACATGGTTCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    451 ACACCGGTATGGATTTATTCTTTAACTTATAATGCGACTTACATGGTTCC    500

BSNT_04557___    501 TTCATTCATTATTTGTGCAATTGTCCTATGTTTATTATTTATGACAGCAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30990___th    501 TTCATTCATTATTTGTGCAATTGTCCTATGTTTATTATTTATGACAGCAC    550

BSNT_04557___    551 CCCGTCTGCTTAAAAGTGACAAAGCGTAA    579
                     |||||||||||||||||||||||||||||
BSU30990___th    551 CCCGTCTGCTTAAAAGTGACAAAGCGTAA    579


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