Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04495 and BSU30900

See Amino acid alignment / Visit BSNT_04495 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence dna-align/BSNT_04495___cotS.1.22522.seq
#    -bsequence dna-align/BSU30900___cotS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04495___cotS-BSU30900___cotS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04495___cotS-BSU30900___cotS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04495___cotS
# 2: BSU30900___cotS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1057
# Identity:    1040/1057 (98.4%)
# Similarity:  1040/1057 (98.4%)
# Gaps:           2/1057 ( 0.2%)
# Score: 5120.0
# 
#
#=======================================

BSNT_04495___      1 GTGTACCAAAAAGAGCATGAAGAACAGATTGTGTCCGAAATTCTCAGCTA     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU30900___co      1 GTGTACCAAAAAGAGCATGAAGAACAGATTGTGTCCGAAATTCTCAGTTA     50

BSNT_04495___     51 TTATCCGTTTCATATCGACCATGTGGCGCTGAAATCGAACAAAAGCGGAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU30900___co     51 TTATCCGTTTCATATCGACCATGTGGCGCTGAAATCGAACAAAAGCGGGC    100

BSNT_04495___    101 GCAAAATCTGGGAAGTCGAAACTGATCATGGCCCAAAGCTGCTAAAAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30900___co    101 GCAAAATCTGGGAAGTCGAAACTGATCATGGCCCAAAGCTGCTAAAAGAA    150

BSNT_04495___    151 GCGCAAATGAAACCGGAGCGGATGCTTTTTATCACTCAGGCACACGCCCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30900___co    151 GCGCAAATGAAACCGGAGCGGATGCTTTTTATCACTCAGGCACACGCCCA    200

BSNT_04495___    201 TTTACAAGAGCAAGGGCTGCCGATAGCGCCGATTCATCAAACAAAAAATG    250
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU30900___co    201 TTTACAAGAGAAAGGGCTGCCGATAGCGCCGATTCATCAAACAAAAAATG    250

BSNT_04495___    251 GCGGTAGCTGCTTGGGCACGGATCAGGTTTCTTACAGCTTATATGACAAA    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU30900___co    251 GCGGTAGCTGCTTGGGCACGGATCAGGTTTCTTACAGTTTATATGACAAA    300

BSNT_04495___    301 GTGACAGGAAAAGAAATGATTTACTATGATGCAGAGCAAATGAAAAAAGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30900___co    301 GTGACAGGAAAAGAAATGATTTACTATGATGCAGAGCAAATGAAAAAAGT    350

BSNT_04495___    351 CATGTCATTTGCCGGCCATTTTCATCATGCCTCAAAAGGATATGTTTGCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30900___co    351 CATGTCATTTGCCGGCCATTTTCATCATGCCTCAAAAGGATATGTTTGCA    400

BSNT_04495___    401 CAGATGAAAGCAAGAAGAGAAGCAGGCTGGGAAAATGGCATAAATTGTAC    450
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU30900___co    401 CAGATGAAAGCAAGAAGAGAAGCAGGCTGGGAAAATGGCACAAATTGTAC    450

BSNT_04495___    451 CGATGGAAGCTGCAGGAACTTGAAGGGAATATGCAGATCGCGGCATCCTA    500
                     ||.||||||||||||||||||||||||||||||||||||||.||||||||
BSU30900___co    451 CGTTGGAAGCTGCAGGAACTTGAAGGGAATATGCAGATCGCAGCATCCTA    500

BSNT_04495___    501 TCCTGATGACGTATTTTCGCAAACTTTCTTAAAACATGCTGATAAAATGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30900___co    501 TCCTGATGACGTATTTTCGCAAACTTTCTTAAAACATGCTGATAAAATGC    550

BSNT_04495___    551 TGGCAAGAGGAAAAGAAGCTCTTCAG-GCGCTTGATGACTCAGAATACGA    599
                     ||||||||||||||||||||| |||| |||||||||||||||||||||||
BSU30900___co    551 TGGCAAGAGGAAAAGAAGCTC-TCAGAGCGCTTGATGACTCAGAATACGA    599

BSNT_04495___    600 AACCTGGACAAAAGAAACGCTCGAGCATGGCGGATTCTGTTTTCAAGATT    649
                     |||||||||||||||.||.||||||||||||||||||||||||||.||||
BSU30900___co    600 AACCTGGACAAAAGAGACACTCGAGCATGGCGGATTCTGTTTTCAGGATT    649

BSNT_04495___    650 TTACATTGGCACGTTTGACAGAGATCGAAGGGGAGCCTTTTTTAAAGGAG    699
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU30900___co    650 TTACATTGGCACGTTTGACTGAGATCGAAGGGGAGCCTTTTTTAAAGGAG    699

BSNT_04495___    700 CTTCACTCGATTACCTACGATTTGCCGTCAAGAGACCTTCGTATTCTGCT    749
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30900___co    700 CTTCACTCGATTACCTACGATTTGCCGTCAAGAGACCTTCGTATTCTGCT    749

BSNT_04495___    750 GAATAAAGTGATGGTTAAGCTTTCTGTATGGGATACTGATTTCATGGTTG    799
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30900___co    750 GAATAAAGTGATGGTTAAGCTTTCTGTATGGGATACTGATTTCATGGTTG    799

BSNT_04495___    800 CACTGCTTGCGGCCTATGACGCAGTGTATCCGCTCACAGAAAAACAGTAC    849
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU30900___co    800 CACTGCTTGCGGCCTACGACGCAGTGTATCCGCTCACAGAAAAACAGTAC    849

BSNT_04495___    850 GAGGTACTTTGGATAGATCTCGCGTTTCCGCATTTGTTCTGTGCAATCGG    899
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU30900___co    850 GAGGTACTTTGGATTGATCTCGCGTTTCCGCATTTGTTCTGTGCAATCGG    899

BSNT_04495___    900 GCACAAATATTATTTGAAGCAAAAGAAAACGTGGTCAGATGAGAAGTATA    949
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30900___co    900 GCACAAATATTATTTGAAGCAAAAGAAAACGTGGTCAGATGAGAAGTATA    949

BSNT_04495___    950 ACTGGGCGCTGCAAAACATGATTTCTGTTGAAGGATCTAAAGATTCGTTT    999
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU30900___co    950 ACTGGGCGCTGCAAAACATGATTTCTGTTGAAGAATCTAAAGATTCGTTT    999

BSNT_04495___   1000 TTGGATAATCTGCCGGAACTGTATAAAAAGATAAAAGCGTATCGGGAGGC   1049
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU30900___co   1000 TTGGATAAACTGCCGGAACTGTATAAAAAGATAAAAGCGTATCGGGAGGC   1049

BSNT_04495___   1050 GAATTGA   1056
                     |||||||
BSU30900___co   1050 GAATTGA   1056


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