Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04488 and BSU30840

See Amino acid alignment / Visit BSNT_04488 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:17
# Commandline: needle
#    -asequence dna-align/BSNT_04488___yteA.1.22522.seq
#    -bsequence dna-align/BSU30840___yteA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04488___yteA-BSU30840___yteA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04488___yteA-BSU30840___yteA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04488___yteA
# 2: BSU30840___yteA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 720
# Identity:     712/720 (98.9%)
# Similarity:   712/720 (98.9%)
# Gaps:           0/720 ( 0.0%)
# Score: 3528.0
# 
#
#=======================================

BSNT_04488___      1 TTGCTTACGAAAGAACAGCTTCAGCATTTAAAAAATGAACTGGAACAAAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt      1 TTGCTTACGAAAGAACAGCTTCAGCATTTAAAAAATGAACTGGAACAAAC     50

BSNT_04488___     51 GAAAAAAGATATCTTAAACCGTTTCAAAGACAATGATCATTTTCAGCTTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt     51 GAAAAAAGATATCTTAAACCGTTTCAAAGACAATGATCATTTTCAGCTTA    100

BSNT_04488___    101 ACTCAGCATTTCCTTATGATTCGTGGGGTGAGCTTTCGGCATACGACAAC    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt    101 ACTCAGCCTTTCCTTATGATTCGTGGGGTGAGCTTTCGGCATACGACAAC    150

BSNT_04488___    151 CATCCCGGCGATCAGGCGACAGAACTTTACGAGCGTGAGAAAGACATCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt    151 CATCCCGGCGATCAGGCGACAGAACTTTACGAGCGTGAGAAAGACATCGC    200

BSNT_04488___    201 TCTAGACTTGCATGAGCGAGAGCACCTTCGGGACATTGAGCATTCATTGA    250
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU30840___yt    201 TCTAGACTTGCATGAGAGAGAGCACCTTCGGGACATTGAGCATTCATTGA    250

BSNT_04488___    251 AGGCGATAGAAAACGGTACGTATGGCATTTGTGAAGTCAGCGGAAAGGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt    251 AGGCGATAGAAAACGGTACGTATGGCATTTGTGAAGTCAGCGGAAAGGAA    300

BSNT_04488___    301 ATCCCGTTCGAACGACTTGAAGCGCTTCCGACTGCCACAACCCTCGCGGA    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt    301 ATCCCTTTCGAACGACTTGAAGCGCTTCCGACTGCCACAACCCTCGCGGA    350

BSNT_04488___    351 GTATTCGTCACAGGACGTGGTTTCCAAGGACCGTCCGATTGAAGAAGAAA    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU30840___yt    351 GTATTCGTCACAGGACGTGGTTTCCAAAGACCGTCCGATTGAAGAAGAAA    400

BSNT_04488___    401 CACCATTCGGGCAATTTGAATTTGATGATGATGAAGAAATCAGAGCGCCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt    401 CACCATTCGGGCAATTTGAATTTGATGATGATGAAGAAATCAGAGCGCCA    450

BSNT_04488___    451 TATGACAGTGAGGATTCCTATCAGGATGTCGAAAAATATGGTAACTCACA    500
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU30840___yt    451 TATGACAGTGAGGATTCCTATCAGGATGTCGAAAAATATGGGAACTCACA    500

BSNT_04488___    501 AACGCCGCAGGATATGGAAAACCCTCCGCTAAGCTATGACGATATGACGA    550
                     ||||||||||||||||||||||||||||||.||||||||.||||||||||
BSU30840___yt    501 AACGCCGCAGGATATGGAAAACCCTCCGCTCAGCTATGATGATATGACGA    550

BSNT_04488___    551 TGAATGCCGAAGAGAATATCGGCAATACGGAGTCTTACGAAAATTTCATC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt    551 TGAATGCCGAAGAGAATATCGGCAATACGGAGTCTTACGAAAATTTCATC    600

BSNT_04488___    601 GCTACAGATATCACTGGAAAAGAAATTACCGTTTATCAAAGCAGAGCCCA    650
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU30840___yt    601 GCTACAGATATCACTGGGAAAGAAATTACCGTTTATCAAAGCAGAGCCCA    650

BSNT_04488___    651 TGAGCGCTATGAAGAAGAACTTGACGAAGAGGGAATCATGACCACATTCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30840___yt    651 TGAGCGCTATGAAGAAGAACTTGACGAAGAGGGAATCATGACCACATTCG    700

BSNT_04488___    701 GCGATCTCCACGCTGATTGA    720
                     ||||||||||||||||||||
BSU30840___yt    701 GCGATCTCCACGCTGATTGA    720


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