Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04486 and BSU30830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_04486___menF.1.22522.seq
# -bsequence dna-align/BSU30830___menF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04486___menF-BSU30830___menF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04486___menF-BSU30830___menF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04486___menF
# 2: BSU30830___menF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1461
# Identity: 1405/1461 (96.2%)
# Similarity: 1405/1461 (96.2%)
# Gaps: 45/1461 ( 3.1%)
# Score: 6981.0
#
#
#=======================================
BSNT_04486___ 1 GTGTATGGTATTAAAAGCATTTTAAGGATTATGGAGGAATGTCTCATGGT 50
|||||
BSU30830___me 1 ---------------------------------------------ATGGT 5
BSNT_04486___ 51 GACAACGGTGCAGCGTACGTTCCGAAAGGAAGTTCTACATGCATTACATA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 6 GACAACGGTGCAGCGTACGTTCCGAAAGGAAGTTCTACATGCATTACATA 55
BSNT_04486___ 101 AAGCCAAAGAAGTCAACCATGCTGTCTTAATAAGCTATTCGAGACAAATC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 56 AAGCCAAAGAAGTCAACCATGCTGTCTTAATAAGCTATTCGAGACAAATC 105
BSNT_04486___ 151 GAGTCTCTTGACCCTCTATCATTTTTCAATTACGGAGCAAAAAAATATAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 106 GAGTCTCTTGACCCTCTATCATTTTTCAATTACGGAGCAAAAAAATATAC 155
BSNT_04486___ 201 AGGCAATCGATTTTTTTGGTCAGATCCTGAAAGTGAATTGACAATAGTCG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 156 AGGCAATCGATTTTTTTGGTCAGATCCTGAAAGTGAATTGACAATAGTCG 205
BSNT_04486___ 251 GTCTTGGCAAAGAAGCGGTTTTCCAGACAAATCAAAAAAACAGCGAGCGG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 206 GTCTTGGCAAAGAAGCGGTTTTCCAGACAAATCAAAAAAACAGCGAGCGG 255
BSNT_04486___ 301 TATCGTGAGGTTTTTGAACAATGGGAGCGCTTTAAAAAGACGGCTTTTCA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 256 TATCGTGAGGTTTTTGAACAATGGGAGCGCTTTAAAAAGACGGCTTTTCA 305
BSNT_04486___ 351 TATTTATGAAGAAGAAAAGCTGCAGCATTCTGCAGTGGGACCTGTGTTAT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 306 TATTTATGAAGAAGAAAAGCTGCAGCATTCTGCAGTGGGACCTGTGTTAT 355
BSNT_04486___ 401 TCGGAGGATTTTCTTTTGACCCTTGCGAAGAAAGAGGTTCACAATGGGAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 356 TCGGAGGATTTTCTTTTGACCCTTGCGAAGAAAGAGGTTCACAATGGGAC 405
BSNT_04486___ 451 CATTTCTCGGAAGGGGATTTCTTTGTGCCTGCGCTTATGCTGACGATGAC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 406 CATTTCTCGGAAGGGGATTTCTTTGTGCCTGCGCTTATGCTGACGATGAC 455
BSNT_04486___ 501 TGCTGAAGGCCCGTTCTTAACAGTTAACAGATGGGTAAGCGGAGGAGAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 456 TGCTGAAGGCCCGTTCTTAACAGTTAACAGATGGGTAAGCGGAGGAGAAG 505
BSNT_04486___ 551 ACGCAGAAGCTGTTTTAGAAGGCTTAAAAGCTTTTGCGGCGGAATTTATG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 506 ACGCAGAAGCTGTTTTAGAAGGCTTAAAAGCTTTTGCGGCGGAATTTATG 555
BSNT_04486___ 601 GTTCCTGATTTCAAGCAAGAAGATCAGGCTGTGATTGCAGCAGCCGAAGA 650
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 556 GTTCCCGATTTCAAGCAAGAAGATCAGGCTGTGATTGCAGCAGCCGAAGA 605
BSNT_04486___ 651 GCTGGATAAGGATGATTGGCTGAAAGCAATCGAAACGGCCACAAGCCAAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 606 GCTGGATAAGGATGATTGGCTGAAAGCAATCGAAACGGCCACAAGCCAAA 655
BSNT_04486___ 701 TTAAAGAGAAACAATATGATAAGGTTGTTCTTGCCCGAGAGCTGCTGCTC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 656 TTAAAGAGAAACAATATGATAAGGTTGTTCTTGCCCGAGAGCTGCTGCTC 705
BSNT_04486___ 751 ACGTTTGACGGTCCAATCCAAATTGAACCGGTGCTTAAAACGCTTCTGGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 706 ACGTTTGACGGTCCAATCCAAATTGAACCGGTGCTTAAAACGCTTCTGGA 755
BSNT_04486___ 801 CGATCAGCAGACAAGCTATGTTTTTGCAATTGAACAAGAAGGCAAAACCT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 756 CGATCAGCAGACAAGCTATGTTTTTGCAATTGAACAAGAAGGCAAAACCT 805
BSNT_04486___ 851 TTGTCGGCGCGTCTCCGGAAAGACTGATCAAAAGAGACGGCGGCACTGTC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 806 TTGTCGGCGCGTCTCCGGAAAGACTGATCAAAAGAGACGGCGGCACTGTC 855
BSNT_04486___ 901 ATGTCTTCCTGTCTGGCAGGCTCCATTAAACGAGGCGTGAATGAAGAAGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 856 ATGTCTTCCTGTCTGGCAGGCTCCATTAAACGAGGCGTGAATGAAGAAGA 905
BSNT_04486___ 951 CGACCGCCGGATAGGCCTTGAATTATTAAACGATGAGAAAAACCTGCTTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 906 CGACCGCCGGATAGGCCTTGAATTATTAAACGATGAGAAAAACCTGCTTG 955
BSNT_04486___ 1001 AGCATGATATTGTGGTAGGTATGATTCATAATGCTTTTGTATCAAGCTGT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 956 AGCATGATATTGTGGTAGGTATGATTCATAATGCTTTTGTATCAAGCTGT 1005
BSNT_04486___ 1051 TCAGAGGTTGAAAAGCCTGATGGACCTGTTTTGTACAAAACAAAAAGCGT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 1006 TCAGAGGTTGAAAAGCCTGATGGACCTGTTTTGTACAAAACAAAAAGCGT 1055
BSNT_04486___ 1101 TCAGCACCTGTTTACGCCGATTGTCGGACAGCTGCGCGAGTCTGCTTCAA 1150
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU30830___me 1056 TCAGCACCTGTTTACGCCGATTGTCGGACAGCTGCGCGAGTCTGCTTCGA 1105
BSNT_04486___ 1151 TTTTTGACTTAATTGAGAAGCTGCATCCCACTCCGGCGCTCGGGGGAGCA 1200
|||||||||||||||||||||||||.||||||||.|||||.||||||.||
BSU30830___me 1106 TTTTTGACTTAATTGAGAAGCTGCACCCCACTCCCGCGCTTGGGGGATCA 1155
BSNT_04486___ 1201 CCTCAGGAAAAAGCTGTTGACGTGATCAGGGAGATTGAACCGATGTCTCG 1250
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU30830___me 1156 CCTCAGGAAAAAGCTGTTGACGTGATCAGGGAGATTGAACCGATGTCCCG 1205
BSNT_04486___ 1251 CGGCTGGTATGCTGCCCCTATCGGCTGGATTGACAGCCAGGATAACGGGG 1300
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU30830___me 1206 CGGCTGGTATGCGGCCCCTATCGGCTGGATTGACAGCCAGGATAACGGGG 1255
BSNT_04486___ 1301 AATTCGCGGTAGCCATTCGTTCAGGGCTGATCGAAGGAAGCACTGCAAGG 1350
||||||||||.|||||||||||||||||.||||||||||||||.||||||
BSU30830___me 1256 AATTCGCGGTCGCCATTCGTTCAGGGCTCATCGAAGGAAGCACAGCAAGG 1305
BSNT_04486___ 1351 CTGTTTGCCGGGTGCGGTATTGTGGAAGACTCGGAACCAATCTCGGAATA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 1306 CTGTTTGCCGGGTGCGGTATTGTGGAAGACTCGGAACCAATCTCGGAATA 1355
BSNT_04486___ 1401 TGAAGAAACACAGATTAAATTGAAGCCGATGATCTCTGCATTAGGAGGTG 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30830___me 1356 TGAAGAAACACAGATTAAATTGAAGCCGATGATCTCTGCATTAGGAGGTG 1405
BSNT_04486___ 1451 AGAGGCGTTGA 1461
|||||||||||
BSU30830___me 1406 AGAGGCGTTGA 1416
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