Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04479 and BSU30780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:15
# Commandline: needle
# -asequence dna-align/BSNT_04479___menC.1.22522.seq
# -bsequence dna-align/BSU30780___menC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04479___menC-BSU30780___menC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04479___menC-BSU30780___menC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04479___menC
# 2: BSU30780___menC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1116
# Identity: 1101/1116 (98.7%)
# Similarity: 1101/1116 (98.7%)
# Gaps: 0/1116 ( 0.0%)
# Score: 5445.0
#
#
#=======================================
BSNT_04479___ 1 ATGATCGAAATAGAAAAAATCACGCTTTACCATTTGAGCATGAACTTAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 1 ATGATCGAAATAGAAAAAATCACGCTTTACCATTTGAGCATGAACTTAAA 50
BSNT_04479___ 51 GAAACCGTTTAAAAACAGTATCGAAACGCTTCAAGAGCGTAAATTTCTGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 51 GAAACCGTTTAAAAACAGTATCGAAACGCTTCAAGAGCGTAAATTTCTGA 100
BSNT_04479___ 101 TCGTGGAAGCCATTGATACAACAGGTGTCACAGGCTGGGGAGAAGTTTCC 150
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU30780___me 101 TCGTGGAAGCCATTGATACATCAGGTGTCACAGGCTGGGGAGAAGTTTCC 150
BSNT_04479___ 151 GCTTTCTCTTCGCCTTGGTACACCGAGGAAACCATTGGAACATGTTTGCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 151 GCTTTCTCTTCGCCTTGGTACACCGAGGAAACCATTGGAACATGTTTGCA 200
BSNT_04479___ 201 TATGCTAAAAGATTTTTTTATCCCAAATGTGGTCGGCCGTGAATTCAATC 250
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU30780___me 201 TATGCTAAAAGATTTTTTTATCCCAAATGTCGTCGGCCGTGAATTCAATC 250
BSNT_04479___ 251 ACCCTTCAGAAGTGCCGGACAGCCTGGCGCGTTATAAAGGAAACCGGATG 300
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU30780___me 251 ACCCTTCAGAAGTGCCGGACAGCCTGGCGCGGTATAAAGGAAACCGGATG 300
BSNT_04479___ 301 GCAAAAGCGGGACTTGAATCGGCTGTATGGGATATCTATGCCAAAAAGAA 350
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU30780___me 301 GCAAAAGCGGGACTTGAATCGGCTGTATGGGATATTTATGCCAAAAAGAA 350
BSNT_04479___ 351 GGGCGTATCCCTTGCTGAGGCATTGGGCGGAACAAGAGATAAAGTCCCTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 351 GGGCGTATCCCTTGCTGAGGCATTGGGCGGAACAAGAGATAAAGTCCCTG 400
BSNT_04479___ 401 CCGGGGTGGTAGTCGGCCTGGCGCCTCTTGACGATATGCTGAAGGAAATT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 401 CCGGGGTGGTAGTCGGCCTGGCGCCTCTTGACGATATGCTGAAGGAAATT 450
BSNT_04479___ 451 GAGAGCTATCAAAAAGAAGGTTATCAAAGAATAAAAATTAAAATTCAGCC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 451 GAGAGCTATCAAAAAGAAGGTTATCAAAGAATAAAAATTAAAATTCAGCC 500
BSNT_04479___ 501 TGGGCAGGATGTGGAATTGGTCAAGGCCATCCGCAGCCGATTCCCAAACA 550
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU30780___me 501 TGGGCAGGATGTGGAATTGGTCAAGGCCATCCGCAGCCGATTCCCAACCA 550
BSNT_04479___ 551 TCCCGCTCATGGCTGATGCCAATTCATCCTATGAGCTGAAGGATATCAGC 600
|||||||.|||||.|||||||||||.||.||.||.|||||||||||||||
BSU30780___me 551 TCCCGCTTATGGCCGATGCCAATTCCTCTTACGAACTGAAGGATATCAGC 600
BSNT_04479___ 601 CGTTTAAAGGAGCTTGATGACTATCATTTAATGATGATTGAGCAGCCGCT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 601 CGTTTAAAGGAGCTTGATGACTATCATTTAATGATGATTGAGCAGCCGCT 650
BSNT_04479___ 651 CCAAGCTGACGATATCGTTGACCACCGCCACCTGCAGAAACATTTGAAAA 700
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU30780___me 651 CCAAGCTGACGATATCGTTGACCACCGCCACTTGCAGAAACATTTGAAAA 700
BSNT_04479___ 701 CGGCCATTTGCCTTGATGAGAGCATTTGTTCAGTTGATGATGCGAGACGG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 701 CGGCCATTTGCCTTGATGAGAGCATTTGTTCAGTTGATGATGCGAGACGG 750
BSNT_04479___ 751 GCAATTGAGCTAGGAAGCTGCAAAATTATTAATATAAAACCTTCTCGTGT 800
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 751 GCGATTGAGCTAGGAAGCTGCAAAATTATTAATATAAAACCTTCTCGTGT 800
BSNT_04479___ 801 CGGCGGCTTAACAGAAGCCTTAAAAATTCATGATTTATGCAAAGAGCATC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 801 CGGCGGCTTAACAGAAGCCTTAAAAATTCATGATTTATGCAAAGAGCATC 850
BSNT_04479___ 851 ATATGCAGGTTTGGTGCGGCGGAATGCTGGAAACAGGCATATCAAGAGCG 900
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU30780___me 851 ATATGCAGGTTTGGTGCGGAGGAATGCTGGAAACAGGCATATCAAGAGCG 900
BSNT_04479___ 901 CAGAACGTGGCGCTTGCTTCACTGCCTCAATTCACAATACCTGGCGATAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 901 CAGAACGTGGCGCTTGCTTCACTGCCTCAATTCACAATACCTGGCGATAT 950
BSNT_04479___ 951 ATCTTCATCCTCACGCTATTGGGATGAAGATATTGTAACCCCTGATATTC 1000
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU30780___me 951 ATCTTCATCCTCACGCTATTGGGATGAAGATATTGTAACTCCTGATATTC 1000
BSNT_04479___ 1001 GTATTGATAATGGATTTATTTCTGTGTCAAAACAGCCTGGTTTAGGGGTT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 1001 GTATTGATAATGGATTTATTTCTGTGTCAAAACAGCCTGGTTTAGGGGTT 1050
BSNT_04479___ 1051 GAGGTAAACCAAGATATTATGCGAAAATATGTGACCAAAATGGATGTTTT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30780___me 1051 GAGGTAAACCAAGATATTATGCGAAAATATGTGACCAAAATGGATGTTTT 1100
BSNT_04479___ 1101 CACACAGCATGGTTAA 1116
||||||||||||||||
BSU30780___me 1101 CACACAGCATGGTTAA 1116
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