Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04468 and E2

See Amino acid alignment / Visit BSNT_04468 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence dna-align/BSNT_04468___rpmE2.1.22522.seq
#    -bsequence dna-align/BSU30700___ytiA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04468___rpmE2-BSU30700___ytiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04468___rpmE2-BSU30700___ytiA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04468___rpmE2
# 2: BSU30700___ytiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     246/249 (98.8%)
# Similarity:   246/249 (98.8%)
# Gaps:           0/249 ( 0.0%)
# Score: 1218.0
# 
#
#=======================================

BSNT_04468___      1 ATGAAAGAAGGAATTCATCCAAAGAACCACAAAGTGATATTTCAGGATGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30700___yt      1 ATGAAAGAAGGAATTCATCCAAAGAACCACAAAGTGATATTTCAGGATGT     50

BSNT_04468___     51 CAACAGCGGCTACCGTTTTCTCAGCACCTCTACGAAAACATCTAATGAAA    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU30700___yt     51 CAACAGCGGCTACCGTTTTCTAAGCACCTCTACGAAAACATCTAATGAAA    100

BSNT_04468___    101 CAGCAGAGTGGGAAGACGGAAACACATATCCTGTCATTAAAGTAGAGGTA    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU30700___yt    101 CAGCAGAGTGGGAGGACGGAAACACATATCCTGTCATTAAAGTAGAGGTA    150

BSNT_04468___    151 AGTTCTGACACGCATCCGTTTTATACAGGCCGCCAGAAATTCAATGAAAA    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU30700___yt    151 AGCTCTGACACGCATCCGTTTTATACAGGCCGCCAGAAATTCAATGAAAA    200

BSNT_04468___    201 AGGCGGACGAGTTGAGCAGTTCAAAAAACGCTATAACATGGGGAAATAA    249
                     |||||||||||||||||||||||||||||||||||||||||||||||||
BSU30700___yt    201 AGGCGGACGAGTTGAGCAGTTCAAAAAACGCTATAACATGGGGAAATAA    249


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