Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04460 and BSU30640

See Amino acid alignment / Visit BSNT_04460 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence dna-align/BSNT_04460___ytkC.1.22522.seq
#    -bsequence dna-align/BSU30640___ytkC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04460___ytkC-BSU30640___ytkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04460___ytkC-BSU30640___ytkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04460___ytkC
# 2: BSU30640___ytkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity:     404/405 (99.8%)
# Similarity:   404/405 (99.8%)
# Gaps:           0/405 ( 0.0%)
# Score: 2016.0
# 
#
#=======================================

BSNT_04460___      1 ATGGATAGAGACTTTGGCATCTTTTCGTTTTTAGCAGTCAGCGTTTCAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30640___yt      1 ATGGATAGAGACTTTGGCATCTTTTCGTTTTTAGCAGTCAGCGTTTCAGC     50

BSNT_04460___     51 AGCGGGTTTTTTCTTTGGAGGTTTTCAGTATTCATTTCTGATTTTGCTCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30640___yt     51 AGCGGGTTTTTTCTTTGGAGGTTTTCAGTATTCATTTCTGATTTTGCTCT    100

BSNT_04460___    101 CTCTTATGGCAATTGAATTTATCAGTACGACTTTGAAGGAAACCATTATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30640___yt    101 CTCTTATGGCAATTGAATTTATCAGTACGACTTTGAAGGAAACCATTATT    150

BSNT_04460___    151 CACAAACTGTCATTTAAAAAGGTATTTGCCCGGCTTGTCAAAAAATTAGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30640___yt    151 CACAAACTGTCATTTAAAAAGGTATTTGCCCGGCTTGTCAAAAAATTAGT    200

BSNT_04460___    201 CACGCTGGCTCTGATCTCTGTATGCCACTTTTTTGATCAGCTGCTGAATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30640___yt    201 CACGCTGGCTCTGATCTCTGTATGCCACTTTTTTGATCAGCTGCTGAATA    250

BSNT_04460___    251 CACAGGGATCAATTCGTGACTTGGCTATTATGTTTTATATTCTTTATGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30640___yt    251 CACAGGGATCAATTCGTGACTTGGCTATTATGTTTTATATTCTTTATGAA    300

BSNT_04460___    301 TCTGTGCAAATTGTTGTGACAGCCAGTTCTCTTGGCATACCGGTTCCTCA    350
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU30640___yt    301 TCTGTGCAAATTGTTGTGACAGCCAGCTCTCTTGGCATACCGGTTCCTCA    350

BSNT_04460___    351 GATGCTTGTCGATCTTTTAGAAACGTTAAAAAATAAATTTAAGCGCAAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30640___yt    351 GATGCTTGTCGATCTTTTAGAAACGTTAAAAAATAAATTTAAGCGCAAAC    400

BSNT_04460___    401 CGTAA    405
                     |||||
BSU30640___yt    401 CGTAA    405


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