Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04457 and BSU30620

See Amino acid alignment / Visit BSNT_04457 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence dna-align/BSNT_04457___ytlD.1.22522.seq
#    -bsequence dna-align/BSU30620___ytlD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04457___ytlD-BSU30620___ytlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04457___ytlD-BSU30620___ytlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04457___ytlD
# 2: BSU30620___ytlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity:     811/813 (99.8%)
# Similarity:   811/813 (99.8%)
# Gaps:           0/813 ( 0.0%)
# Score: 4047.0
# 
#
#=======================================

BSNT_04457___      1 TTGAGAAACAGCAAAGAAACCATTGATCTGCTTCACGAGCAGTATCAATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt      1 TTGAGAAACAGCAAAGAAACCATTGATCTGCTTCACGAGCAGTATCAATT     50

BSNT_04457___     51 CAAACAGAAAAAGGAAAAGTGGAAGGTCCATTCCTTTCAGCTTGCCATAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt     51 CAAACAGAAAAAGGAAAAGTGGAAGGTCCATTCCTTTCAGCTTGCCATAT    100

BSNT_04457___    101 TTATTCTCTTTTTCTCGGGCTGGGAAATCTCCAGCAGGCAGGGCTGGATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    101 TTATTCTCTTTTTCTCGGGCTGGGAAATCTCCAGCAGGCAGGGCTGGATC    150

BSNT_04457___    151 GATCCGCTGATCTTCAGCTCTCCATCAGCTGTGTGGCGATTATTGCTGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    151 GATCCGCTGATCTTCAGCTCTCCATCAGCTGTGTGGCGATTATTGCTGGA    200

BSNT_04457___    201 GAAACTTGGTGACGGTTCTTTACTGTCACACATCGGCGTCACTTTATTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    201 GAAACTTGGTGACGGTTCTTTACTGTCACACATCGGCGTCACTTTATTTG    250

BSNT_04457___    251 AAACGGTGCTTGGCTTTTTGCTCGGGACGTTTATGGGCACGTGCCTAGCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    251 AAACGGTGCTTGGCTTTTTGCTCGGGACGTTTATGGGCACGTGCCTAGCC    300

BSNT_04457___    301 GCTTTGTTATGGTGGTCTAACCGACTTGCCAGAATTTTAGATCCGTATCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    301 GCTTTGTTATGGTGGTCTAACCGACTTGCCAGAATTTTAGATCCGTATCT    350

BSNT_04457___    351 TGTGATTTTGAACGCAATGCCGAAAGTGGCCCTGGGCCCGATCCTGATTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    351 TGTGATTTTGAACGCAATGCCGAAAGTGGCCCTGGGCCCGATCCTGATTG    400

BSNT_04457___    401 TCGCGCTCGGTCCCAGTTTTATCAGCATCATTGCGATGGGAGCCATCATC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    401 TCGCGCTCGGTCCCAGTTTTATCAGCATCATTGCGATGGGAGCCATCATC    450

BSNT_04457___    451 AGCGTCATTATCACAACCATCGTTGTCTATACCGCCTTCCAGGAGGTCGA    500
                     |||||||||||||||||||||||||||||.|||||||||||.||||||||
BSU30620___yt    451 AGCGTCATTATCACAACCATCGTTGTCTACACCGCCTTCCAAGAGGTCGA    500

BSNT_04457___    501 CGAAAACTATACGAAAGTCATGAAAACATTCGGCGCAAAAAAGTGGGTTA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    501 CGAAAACTATACGAAAGTCATGAAAACATTCGGCGCAAAAAAGTGGGTTA    550

BSNT_04457___    551 TTTTTAAAGAAGTCATACTGCCTGCATCCTCCCCCGCGATTATTTCAACA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    551 TTTTTAAAGAAGTCATACTGCCTGCATCCTCCCCCGCGATTATTTCAACA    600

BSNT_04457___    601 CTAAAAGTGAACGTCGGTTTATCATGGGTTGGCGTTATTGTAGGGGAATT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    601 CTAAAAGTGAACGTCGGTTTATCATGGGTTGGCGTTATTGTAGGGGAATT    650

BSNT_04457___    651 CCTCGTTTCGAAGGTCGGATTAGGATATATGATTATTTACGGATTCCAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    651 CCTCGTTTCGAAGGTCGGATTAGGATATATGATTATTTACGGATTCCAAG    700

BSNT_04457___    701 TCTTCAATTTTACACTCGTCTTCTTAAGCCTGCTGATCATCGCCATCTTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    701 TCTTCAATTTTACACTCGTCTTCTTAAGCCTGCTGATCATCGCCATCTTC    750

BSNT_04457___    751 GCCACTCTGATGTATCAGGGCGTCGAGCTGCTGGAAAAGAAATGGACGAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30620___yt    751 GCCACTCTGATGTATCAGGGCGTCGAGCTGCTGGAAAAGAAATGGACGAA    800

BSNT_04457___    801 GGGGAGGACATAA    813
                     |||||||||||||
BSU30620___yt    801 GGGGAGGACATAA    813


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