Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04444 and BSU30510

See Amino acid alignment / Visit BSNT_04444 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence dna-align/BSNT_04444___ytpA.1.22522.seq
#    -bsequence dna-align/BSU30510___ytpA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04444___ytpA-BSU30510___ytpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04444___ytpA-BSU30510___ytpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04444___ytpA
# 2: BSU30510___ytpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 780
# Identity:     775/780 (99.4%)
# Similarity:   775/780 (99.4%)
# Gaps:           0/780 ( 0.0%)
# Score: 3855.0
# 
#
#=======================================

BSNT_04444___      1 ATGTGGACCTGGAAAGCAGACAGACCTGTTGCAGTGATTGTAATCATTCA     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU30510___yt      1 ATGTGGACCTGGAAAGCAGACAGACCTGTTGCCGTGATTGTAATCATTCA     50

BSNT_04444___     51 CGGGGCAAGTGAATATCACGGACGATATAAATGGCTGATTGAAATGTGGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt     51 CGGGGCAAGTGAATATCACGGACGATATAAATGGCTGATTGAAATGTGGC    100

BSNT_04444___    101 GGTCTTCGGGTTATCACGTTGTCATGGGCGATTTGCCTGGACAGGGAACA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    101 GGTCTTCGGGTTATCACGTTGTCATGGGCGATTTGCCTGGACAGGGAACA    150

BSNT_04444___    151 ACGACAAGAGCGAGAGGGCATATTCGCTCGTTTCAAGAATACATTGATGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    151 ACGACAAGAGCGAGAGGGCATATTCGCTCGTTTCAAGAATACATTGATGA    200

BSNT_04444___    201 AGTAGATGCTTGGATAGATAAAGCGCGAACCTTTGATCTGCCGGTTTTTC    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU30510___yt    201 AGTAGATGCTTGGATAGATAAAGCGCGAACCTTTGATCTTCCGGTTTTTC    250

BSNT_04444___    251 TTCTAGGTCACAGCATGGGCGGTCTGGTCGCGATTGAATGGGTTAAACAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    251 TTCTAGGTCACAGCATGGGCGGTCTGGTCGCGATTGAATGGGTTAAACAG    300

BSNT_04444___    301 CAAAGAAATCCCCGGATTACGGGAATTATTTTATCATCACCGTGTCTCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    301 CAAAGAAATCCCCGGATTACGGGAATTATTTTATCATCACCGTGTCTCGG    350

BSNT_04444___    351 ACTGCAAATTAAAGTCAATAAAGCGCTTGATCTTGCATCAAAAGGTCTGA    400
                     |||||||||||||||.|||||||||||||||||||||||||||||.||||
BSU30510___yt    351 ACTGCAAATTAAAGTGAATAAAGCGCTTGATCTTGCATCAAAAGGCCTGA    400

BSNT_04444___    401 ATGTCATCGCTCCGTCACTTAAGGTTGATTCGGGATTATCAATTGATATG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    401 ATGTCATCGCTCCGTCACTTAAGGTTGATTCGGGATTATCAATTGATATG    450

BSNT_04444___    451 GCGACGCGCAATGAGGACGTCATCGAGGCTGACCAAAATGATTCGTTATA    500
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU30510___yt    451 GCGACGCGCAATGAGGACGTCATCGAAGCTGACCAAAATGATTCGTTATA    500

BSNT_04444___    501 CGTCAGGAAAGTTTCTGTCAGATGGTACAGAGAGCTTTTAAAGACAATTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    501 CGTCAGGAAAGTTTCTGTCAGATGGTACAGAGAGCTTTTAAAGACAATTG    550

BSNT_04444___    551 AATCGGCAATGGTGCCGACAGAGGCATTTTTGAAAGTTCCGCTTCTTGTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    551 AATCGGCAATGGTGCCGACAGAGGCATTTTTGAAAGTTCCGCTTCTTGTG    600

BSNT_04444___    601 ATGCAAGCCGGTGATGACAAGCTTGTTGACAAAACGATGGTCATCAAGTG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    601 ATGCAAGCCGGTGATGACAAGCTTGTTGACAAAACGATGGTCATCAAGTG    650

BSNT_04444___    651 GTTTAATGGTGTTGCTTCTCATAATAAAGCATACAGAGAGTGGGAAGGGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    651 GTTTAATGGTGTTGCTTCTCATAATAAAGCATACAGAGAGTGGGAAGGGC    700

BSNT_04444___    701 TTTACCATGAGATCTTCAATGAACCCGAGAGAGAAGATGTTTTTAAAGCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30510___yt    701 TTTACCATGAGATCTTCAATGAACCCGAGAGAGAAGATGTTTTTAAAGCA    750

BSNT_04444___    751 GCAAGAGCGTTTACTGATCAATATATTTGA    780
                     ||||||||||||||||||||||||||||||
BSU30510___yt    751 GCAAGAGCGTTTACTGATCAATATATTTGA    780


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