Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04442 and BSU30500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_04442___ytpB.1.22522.seq
# -bsequence dna-align/BSU30500___ytpB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04442___ytpB-BSU30500___ytpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04442___ytpB-BSU30500___ytpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04442___ytpB
# 2: BSU30500___ytpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1107
# Identity: 1087/1107 (98.2%)
# Similarity: 1087/1107 (98.2%)
# Gaps: 3/1107 ( 0.3%)
# Score: 5367.0
#
#
#=======================================
BSNT_04442___ 1 GTGTTGACAGTACCGGAACATCCTTTTGGATTGATGGCAAAGGTATATCG 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 1 ---TTGACAGTACCGGAACATCCTTTTGGATTGATGGCAAAGGTATATCG 47
BSNT_04442___ 51 AGATATTTTTCCGCTCGTTCATCAAGAGCTGGACATATGGAAGCAAAAAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 48 AGATATTTTTCCGCTCGTTCATCAAGAGCTGGACATATGGAAGCAAAAAT 97
BSNT_04442___ 101 CAGAATCGATTCATAACAGTGAATTGAAAGCACAGGCAACCGCAAGTATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 98 CAGAATCGATTCATAACAGTGAATTGAAAGCACAGGCAACCGCAAGTATT 147
BSNT_04442___ 151 CGGGACAAAACGTTTCACTGTGAAGGCGGCGGCATACTGGCCTTATTGTC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 148 CGGGACAAAACGTTTCACTGTGAAGGCGGCGGCATACTGGCCTTATTGTC 197
BSNT_04442___ 201 AGGCAGCCAAAAACAGAAATGTGTCGAGTTTATCATCGCGTATCAAACGA 250
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU30500___yt 198 AGGCAGCCAAAAGCAGAAATGTGTCGAGTTTATCATCGCGTATCAAACGA 247
BSNT_04442___ 251 TTAGTGATTATTTGGACAATCTGTGTGACCGCAGCACCTCGCTGGACCCG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 248 TTAGTGATTATTTGGACAATCTGTGTGACCGCAGCACCTCGCTGGACCCG 297
BSNT_04442___ 301 CAGGATTTTCGGATGCTCCATGCCTCAATGCAGGATGCACTGACAGTTGG 350
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU30500___yt 298 CAGGATTTTCGGATGCTCCATGCCTCAATGCAGGACGCACTGACAGTTGG 347
BSNT_04442___ 351 GGCGGAACTGCAAAACTATTATCAATTCAGGGAAGAACAGGATGACAGCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 348 GGCGGAACTGCAAAACTATTATCAATTCAGGGAAGAACAGGATGACAGCG 397
BSNT_04442___ 401 GATATCTGCACGAACTGGTCAAAACGTGCCAGCGTGTCCTTGGTTCCATT 450
|||||.||||.||||||||.|||||||||||||||||.||.||.||||||
BSU30500___yt 398 GATATTTGCATGAACTGGTTAAAACGTGCCAGCGTGTTCTCGGCTCCATT 447
BSNT_04442___ 451 GAGCACTATGACATGATTAAACCTTATCTGCTTGAACTGTGCGGCTATTA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 448 GAGCACTATGACATGATTAAACCTTATCTGCTTGAACTGTGCGGCTATTA 497
BSNT_04442___ 501 TTGCGATTTGCAGGTGCATAAGCACGTTATTGAGCATGAGCGTGTTCCGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 498 TTGCGATTTGCAGGTGCATAAGCACGTTATTGAGCATGAGCGTGTTCCGC 547
BSNT_04442___ 551 GGCTTGAAAAGTGGTTTACTCAATATGAATCAGAGCTGCCTGAGATGGAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 548 GGCTTGAAAAGTGGTTTACTCAATATGAATCAGAGCTGCCTGAGATGGAA 597
BSNT_04442___ 601 TGGTATGAATTTTCAGCCTGTGCAGGCTCAACGTTAGGCATTTTCTGTCT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 598 TGGTATGAATTTTCAGCCTGTGCAGGCTCAACGTTAGGCATTTTCTGTCT 647
BSNT_04442___ 651 GGTTGCGTATTCGTTCCAGCCTGATTTCACAGAAAGCACCGCTAAAAAAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 648 GGTTGCGTATTCGTTCCAGCCTGATTTCACAGAAAGCACCGCTAAAAAAA 697
BSNT_04442___ 701 TCCGCGACAGTTATTTTCCTTACATACAGGGCCTTCATATCCTGCTTGAT 750
||||.||||||||||||||||||||||||||.||||||||.||.||||||
BSU30500___yt 698 TCCGAGACAGTTATTTTCCTTACATACAGGGTCTTCATATTCTTCTTGAT 747
BSNT_04442___ 751 TATTTGATTGATCAAGAGGAGGACTTGCTGGAAGGAGACTTGAATTTCTG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 748 TATTTGATTGATCAAGAGGAGGACTTGCTGGAAGGAGACTTGAATTTCTG 797
BSNT_04442___ 801 CTCATATTATCAGTCTCATGAAGAGATGATGAATCGGCTTGAACACTTTA 850
|||.|||||||||||||||||||||||||||.|.||||||||||||||||
BSU30500___yt 798 CTCGTATTATCAGTCTCATGAAGAGATGATGGACCGGCTTGAACACTTTA 847
BSNT_04442___ 851 TCCATAAAGCCGACGAGCATTTACAAGGCATTCCGCATGAAAACTTCCAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 848 TCCATAAAGCCGACGAGCATTTACAAGGCATTCCGCATGAAAACTTCCAT 897
BSNT_04442___ 901 CGTTTAATCAATCGCGGCTTGCTTGGTGTTTATTTGTCAGATGATAAAGT 950
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU30500___yt 898 CGTTTAATCAATCGCGGCTTGCTTGGCGTTTATTTGTCAGATGATAAAGT 947
BSNT_04442___ 951 GGCAGGCCAAAAGGAAATGGGCCGGCTCGCAAAGAAGCTGATCAAAGCCA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 948 GGCAGGCCAAAAGGAAATGGGCCGGCTCGCAAAGAAGCTGATCAAAGCCA 997
BSNT_04442___ 1001 GCGGAAAAACCTCCCTTTTCTTTTATATCAACGGCAGAGCCTACCGGAAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30500___yt 998 GCGGAAAAACCTCCCTTTTCTTTTATATCAACGGCAGAGCCTACCGGAAA 1047
BSNT_04442___ 1051 TTTCAAAAAATGTCCTGGATGAAAAACTCAAAGAAAAAAGCTCAAATCAT 1100
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU30500___yt 1048 TTTCAAAAAATGTCCTGGATGAAAAATTCAAAGAAAAAAGCTCAAATCAT 1097
BSNT_04442___ 1101 TTGCTGA 1107
|||||||
BSU30500___yt 1098 TTGCTGA 1104
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