Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04440 and BSU30480

See Amino acid alignment / Visit BSNT_04440 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence dna-align/BSNT_04440___ytqA.1.22522.seq
#    -bsequence dna-align/BSU30480___ytqA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04440___ytqA-BSU30480___ytqA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04440___ytqA-BSU30480___ytqA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04440___ytqA
# 2: BSU30480___ytqA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity:     962/969 (99.3%)
# Similarity:   962/969 (99.3%)
# Gaps:           0/969 ( 0.0%)
# Score: 4782.0
# 
#
#=======================================

BSNT_04440___      1 GTGATGCAGAACAATCCTTTTCCTTATTCAAATACGGAAAAACGCTATCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt      1 GTGATGCAGAACAATCCTTTTCCTTATTCAAATACGGAAAAACGCTATCA     50

BSNT_04440___     51 TACATTGAATTATCATCTCAGAGAACATTTCGGCCATAAGGTGTTTAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt     51 TACATTGAATTATCATCTCAGAGAACATTTCGGCCATAAGGTGTTTAAAG    100

BSNT_04440___    101 TGGCGCTTGACGGCGGTTTTGACTGTCCAAATCGGGATGGCACCGTAGCC    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    101 TAGCGCTTGACGGCGGTTTTGACTGTCCAAATCGGGATGGCACCGTAGCC    150

BSNT_04440___    151 CACGGAGGCTGTACGTTTTGCAGCGCAGCAGGCTCCGGAGATTTTGCTGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    151 CACGGAGGCTGTACGTTTTGCAGCGCAGCAGGCTCCGGAGATTTTGCTGG    200

BSNT_04440___    201 AAACCGGACCGATGATTTAATTACGCAATTCCACGACATCAAAAACCGCA    250
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU30480___yt    201 AAACCGGACCGATGATTTAATTACGCAATTCCATGACATCAAAAACCGCA    250

BSNT_04440___    251 TGCACGAAAAATGGAAGGACGGCAAGTACATCGCTTATTTTCAGGCTTTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    251 TGCACGAAAAATGGAAGGACGGCAAGTACATCGCTTATTTTCAGGCTTTC    300

BSNT_04440___    301 ACAAACACTCACGCCCCGGTTGAGGTGCTTCGTGAGAAATTCGAATCCGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    301 ACAAACACTCACGCCCCGGTTGAGGTGCTTCGTGAGAAATTCGAATCCGT    350

BSNT_04440___    351 CCTCGCTTTAGATGATGTGGTCGGCATTTCGATCGCCACACGCCCGGACT    400
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    351 CCTCGCCTTAGATGATGTGGTCGGCATTTCGATCGCCACACGCCCGGACT    400

BSNT_04440___    401 GTCTGCCTGATGATGTCGTTGATTACTTGGCAGAGCTGAATGAACGCACC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||.||.
BSU30480___yt    401 GTCTGCCTGATGATGTCGTTGATTACTTGGCAGAGCTGAATGAACGTACG    450

BSNT_04440___    451 TATTTGTGGGTGGAGCTTGGGCTTCAAACAGTTCATGAACGGACTGCACT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    451 TATTTGTGGGTGGAGCTTGGGCTTCAAACAGTTCATGAACGGACTGCACT    500

BSNT_04440___    501 TCTGATCAACCGCGCACATGATTTTAACTGCTATGTGGAAGGCGTCAATA    550
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    501 TTTGATCAACCGCGCACATGATTTTAACTGCTATGTGGAAGGCGTCAATA    550

BSNT_04440___    551 AATTAAGAAAACACGGCATACGTGTCTGCTCGCATATTATCAATGGGCTG    600
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU30480___yt    551 AATTAAGAAAACACGGCATACGTGTCTGCTCGCATATTATCAACGGGCTG    600

BSNT_04440___    601 CCTTTGGAAGACCGGGACATGATGATGGAAACGGCAAAGGCCGTCGCAGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    601 CCTTTGGAAGACCGGGACATGATGATGGAAACGGCAAAGGCCGTCGCAGA    650

BSNT_04440___    651 TTTGGATGTCCAGGGCATTAAAATCCATCTGCTTCACCTACTGAAAGGCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    651 TTTGGATGTCCAGGGCATTAAAATCCATCTGCTTCACCTACTGAAAGGCA    700

BSNT_04440___    701 CGCCGATGGTCAAACAATATGAAAAGGGCAAGCTGGAATTTCTTTCTCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    701 CGCCGATGGTCAAACAATATGAAAAGGGCAAGCTGGAATTTCTTTCTCAA    750

BSNT_04440___    751 GATGATTATGTGCAGCTCGTCTGCGATCAGCTTGAGATCATTCCGCCTGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    751 GATGATTATGTGCAGCTCGTCTGCGATCAGCTTGAGATCATTCCGCCTGA    800

BSNT_04440___    801 AATGATCGTCCACCGCATTACAGGTGACGGACCGATTGAGTTGATGATCG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    801 AATGATCGTCCACCGCATTACAGGTGACGGACCGATTGAGTTGATGATCG    850

BSNT_04440___    851 GGCCAATGTGGAGCGTCAACAAATGGGAAGTGCTTGGCGCCATTAATAAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    851 GGCCAATGTGGAGCGTCAACAAATGGGAAGTGCTTGGCGCCATTAATAAA    900

BSNT_04440___    901 GAGCTAGAAAATCGAGGCAGCTATCAAGGAAAGTTCTTTCAACGGCTTGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30480___yt    901 GAGCTAGAAAATCGAGGCAGCTATCAAGGAAAGTTCTTTCAACGGCTTGA    950

BSNT_04440___    951 GGAGGAATCAGCGCTATGA    969
                     |||||||||||||||||||
BSU30480___yt    951 GGAGGAATCAGCGCTATGA    969


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04440 and BSU30480

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
