Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04434 and BSU30440
See
Amino acid alignment /
Visit
BSNT_04434 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_04434___ytrC.1.22522.seq
# -bsequence dna-align/BSU30440___ytrC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04434___ytrC-BSU30440___ytrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04434___ytrC-BSU30440___ytrC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04434___ytrC
# 2: BSU30440___ytrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1022
# Identity: 710/1022 (69.5%)
# Similarity: 710/1022 (69.5%)
# Gaps: 70/1022 ( 6.8%)
# Score: 2323.0
#
#
#=======================================
BSNT_04434___ 1 ATGGTAGACCGAGGTCTCCTCTATCGAGAGTGGAAGCAGAATCAAGTGGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30440___yt 1 ATGGTAGACCGAGGTCTCCTCTATCGAGAGTGGAAGCAGAATCAAGTGGT 50
BSNT_04434___ 51 GATTTTGTTAAGTATCGTGTTTTTAGTGTTGGCAAATCC----TTTAACG 96
|||||||||||||||||.|||||||||.||||||||||| |.||.||
BSU30440___yt 51 GATTTTGTTAAGTATCGCGTTTTTAGTATTGGCAAATCCGCTTTCTATCG 100
BSNT_04434___ 97 ATTTATCACTCATAT-TCTTTAAACGAGGCATGCCTAG-----CACATTC 140
|||..||..||.| |||| |.|.||| .||.||.| ||
BSU30440___yt 101 --TTAATACGTATTTGTCTT--ATCAAGG-GTGTCTTGATCGCCA----- 140
BSNT_04434___ 141 AGATCCGAAATTTTGTACATTTT-TTGTAGATTACCACATAGACAGCTTG 189
|||.|||.|||.|||| .||||| ||||..||||...||||..||...||
BSU30440___yt 141 AGACCCGCAATATTGT-GATTTTATTGTGAATTATTCCATAAGCAATCTG 189
BSNT_04434___ 190 ATTCAAATTAATTGGGTGATAGGGATTATATTGGCAGTATGTTTGATCGG 239
||..|.||.||.||||||...||..|.||.|||||.||.||.||..||||
BSU30440___yt 190 ATAGATATCAACTGGGTGCCGGGTGTCATTTTGGCGGTCTGCTTCCTCGG 239
BSNT_04434___ 240 GCTTGAACGTTCGAGAGGTACGATGGACTTTTTGTTAGGTCTTCCATATA 289
..|.||.|||||||.|||.||||||||.|||.|.|||.|.||.||.||||
BSU30440___yt 240 AATGGAGCGTTCGAAAGGCACGATGGATTTTATATTAAGCCTCCCGTATA 289
BSNT_04434___ 290 AAAGAAACCAAATTTTCCAAACGAAATTTTGGTTAGGCGCGGTTGTTATT 339
|.||||.|||||||||.||.||.||||||||||||||||...||||.|||
BSU30440___yt 290 ACAGAAGCCAAATTTTTCAGACAAAATTTTGGTTAGGCGGTTTTGTGATT 339
BSNT_04434___ 340 GTGTTTTCGCAATTGGTCGGATTTTTTTTGGCATGGCTGCTGATTCTTTT 389
|||.|.||.||||||.|.||.|||||..|.||||||||||||||||||.|
BSU30440___yt 340 GTGCTGTCACAATTGATTGGCTTTTTACTTGCATGGCTGCTGATTCTTGT 389
BSNT_04434___ 390 CTTAAAACCTGAACAAGTAAACTTTTTTGAACATGGAAGCATTGGTGTTA 439
||..||.||||||||.||..||||||||||.||..|.||||||||.||.|
BSU30440___yt 390 CTATAACCCTGAACACGTCTACTTTTTTGAGCACAGCAGCATTGGAGTAA 439
BSNT_04434___ 440 TGATCACTAGCATTATG--TTTTACTCATTAGTAATGGCCGCAGGGACGT 487
|..|.|..||..||||| |||| |||.|.||.||||||||.||..|||
BSU30440___yt 440 TCGTGATAAGTTTTATGGCTTTT--TCACTGGTGATGGCCGCCGGAGCGT 487
BSNT_04434___ 488 TAGCTGGAAACGCTTTTGCTCAGTTGTTGACAGCTTTTGCAACTTCGGTA 537
||.|||||||.||||||||.||..||||.||.||.|||.||.|..|..||
BSU30440___yt 488 TAACTGGAAATGCTTTTGCCCAACTGTTAACGGCGTTTTCAGCAGCTATA 537
BSNT_04434___ 538 TTGCCGTATTTGATTATCGTTTTGCCATTTTCTAATATAGA----GATTA 583
|||||||||||.|||||.|..|||||..||...||..|||| |.||.
BSU30440___yt 538 TTGCCGTATTTAATTATTGCATTGCCGGTTGGAAACCTAGAAGTTGTTTT 587
BSNT_04434___ 584 TCTCAGGGGTTCAAAT---TTGGAAACTCTTCCCTAACATTGAATATTAC 630
| |||.|.||| |.||||| |.||||||..|..|||...|||.
BSU30440___yt 588 T------GGTGCGAATATATGGGAAA-TATTCCCTTCCCCTGAGAGTTAT 630
BSNT_04434___ 631 TTCGATTTTGAAAATAATTTGATGGA--CTTTTCTCCAATTGCTTATGTG 678
|||..|.|.|.||..||||| ||.|| ||..| .||.|||..|||.||.
BSU30440___yt 631 TTCTCTCTGGCAAGCAATTT-ATCGAACCTAGT-ACCGATTAGTTACGTT 678
BSNT_04434___ 679 GATTCAAGTTGGGTGGCGG----AAAGTAAATATTTATTACTTATCCCTG 724
| |.|| ||..||||.| |.|||||||||.|.|||.|.||.||.|
BSU30440___yt 679 G--TAAA--TGAATGGCTGATTAACAGTAAATATCTTTTATTGATTCCAG 724
BSNT_04434___ 725 CAGTGATGAGTATTCTCTTTTATTTCATTGGATATATCAGTTTTATAAAA 774
|.||.|||||.||.||.|||||.||.|||||.|.|||.||.||.|..||.
BSU30440___yt 725 CCGTAATGAGCATGCTATTTTACTTGATTGGCTTTATAAGCTTCAAGAAG 774
BSNT_04434___ 775 CATCATAATGAGCGTAATGGATACTTTTTCTTATGGAAAACATTAGATCG 824
|.||..|.|||.||.||.|||.||||||||||||||||.|.|||||||||
BSU30440___yt 775 CTTCCAAGTGAACGGAACGGACACTTTTTCTTATGGAACAGATTAGATCG 824
BSNT_04434___ 825 GCCTATCCAAATCCTTGTCATCGTGTTAGGAATCCTGGGTTTTGGTATAG 874
.||..|.|||||.||.||.||.|..||.||.|||||.||.||||||.||.
BSU30440___yt 825 CCCGGTGCAAATTCTGGTTATGGCTTTCGGCATCCTTGGATTTGGTTTAT 874
BSNT_04434___ 875 TGGGGCATTCTGCGGGTGAATCCATAGCGGGTTACATTATCGGAATGATT 924
|.||..|.|.|.|.||..|.|||||....|||||.|||.|.||.|||||.
BSU30440___yt 875 TTGGATACTATACCGGACATTCCATTATTGGTTATATTTTGGGTATGATC 924
BSNT_04434___ 925 ATCGGAGGAATTGTAGGATT-TTTGATCAGTTATTTTTCCATCTTTAAAA 973
||.||||.|.|.|..||||| |||| |.||.||.||.||.||.|.|||.|
BSU30440___yt 925 ATTGGAGCAGTGGCTGGATTCTTTG-TGAGCTACTTCTCTATTTATAAGA 973
BSNT_04434___ 974 AA--------GTAAGACATTAA 987
|| ||||
BSU30440___yt 974 AAACAAAAGTGTAA-------- 987
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.