Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04433 and BSU30430

See Amino acid alignment / Visit BSNT_04433 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence dna-align/BSNT_04433___ytrD.1.22522.seq
#    -bsequence dna-align/BSU30430___ytrD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04433___ytrD-BSU30430___ytrD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04433___ytrD-BSU30430___ytrD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04433___ytrD
# 2: BSU30430___ytrD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 979
# Identity:     912/979 (93.2%)
# Similarity:   912/979 (93.2%)
# Gaps:           2/979 ( 0.2%)
# Score: 4280.0
# 
#
#=======================================

BSNT_04433___      1 ATGCCGGATTCCGGTCTGCTTTATAAGGAGTGGAAACAAAATAAAGTCGC     50
                     .|||||||||||||.||||||||.||.||||||...||.|||||||||||
BSU30430___yt      1 TTGCCGGATTCCGGACTGCTTTACAAAGAGTGGCGGCAGAATAAAGTCGC     50

BSNT_04433___     51 CTTAGTTATCACCATTTTGGTTTTTATACTAGGTAATCCTTTATCGATTT    100
                     ||||||||||||||||||||||||||||.||||||||||.|||||.||||
BSU30430___yt     51 CTTAGTTATCACCATTTTGGTTTTTATATTAGGTAATCCATTATCAATTT    100

BSNT_04433___    101 TCAATATGTATCTTACCTATCAAGGCTGTGTCACCTCAAAAGAAAATTGG    150
                     |.|||||||||||.|.||||||||||||||||||...|||||||||||||
BSU30430___yt    101 TAAATATGTATCTCATCTATCAAGGCTGTGTCACTGGAAAAGAAAATTGG    150

BSNT_04433___    151 GTTGGTCCCTGCGTATTCGGTGTTGATTATTTAAACGGCACATTTATCTC    200
                     ||.||.||||||||||||.|.||||||||||||||..||.||||||||||
BSU30430___yt    151 GTCGGCCCCTGCGTATTCAGCGTTGATTATTTAAATAGCTCATTTATCTC    200

BSNT_04433___    201 ATTTTTTTGGATTTGGGGAGTCGTTTTGGCGGTCAGCCAGCTTGGGATTG    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU30430___yt    201 ATTGTTTTGGATTTGGGGAGTCGTTTTGGCGGTCAGCCAGCTTGGGATTG    250

BSNT_04433___    251 AACGTAGCAAGAGCTTCTTTGATTTTACATTAAGCCTACCATATACACGA    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU30430___yt    251 AACGTAGCAAGAGCTTCTTTGATTTTACATTAAGCCTTCCATATACACGA    300

BSNT_04433___    301 GGGCAGATATTTCATGCGAAGTTCTTTACCGGCGGAATGGTGATTGTGGT    350
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU30430___yt    301 GGGCAGATATTTCATGCGAAGTTCCTTACCGGCGGAATGGTGATTGTGGT    350

BSNT_04433___    351 GCCGCAGCTCATAGGTTACGTTTTGTCTGTTTTGCTGATCATGCTTTTGA    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU30430___yt    351 GCCGCAGCTCATAGGTTATGTTTTGTCTGTTTTGCTGATCATGCTTTTGA    400

BSNT_04433___    401 AGCCAGATCAGGCCGTTTATTTTCACAATTACAGCCTTGGG-ATGATCAT    449
                     |||||||||||||||||||||||||||||||||| |||||| |||||.||
BSU30430___yt    401 AGCCAGATCAGGCCGTTTATTTTCACAATTACAG-CTTGGGAATGATTAT    449

BSNT_04433___    450 TGTCAGCATGCTGGCTTATTCGCTTGTTATGGCGGGTGGAGCTCTGACAG    499
                     |||.|||||||||||||||||..|.||||||||.||.||||||.||||||
BSU30430___yt    450 TGTTAGCATGCTGGCTTATTCTTTGGTTATGGCCGGAGGAGCTTTGACAG    499

BSNT_04433___    500 GCAATATTTTTGCCCAGCTTTTGGTCTCATTTACCGTGGCCATTTCGCCA    549
                     ||||||.|||.||.||||||.|.||||||||||||||||||||||||||.
BSU30430___yt    500 GCAATAGTTTCGCACAGCTTCTAGTCTCATTTACCGTGGCCATTTCGCCG    549

BSNT_04433___    550 TTTTTGCTCATCAGCCTGCCTGCGATCAACCTCGAGATCCTTATTGGCGG    599
                     |||||.||||||||||||||||.|||||||||||||||||||.|||||||
BSU30430___yt    550 TTTTTACTCATCAGCCTGCCTGTGATCAACCTCGAGATCCTTTTTGGCGG    599

BSNT_04433___    600 ATCAATCGATTTTATCCATGGTCCAGTACCCAAATGGGTGCAGTATTTCA    649
                     ||||||.|||||||||||||||||||||||.|||||||||||||||||||
BSU30430___yt    600 ATCAATAGATTTTATCCATGGTCCAGTACCTAAATGGGTGCAGTATTTCA    649

BSNT_04433___    650 TTCCTATAATTTATGTAGACTCAAAATGGGCTGAGAATTCACCATATTAT    699
                     ||||.|||||||||||||||||.|||||||||||||||||||||||||||
BSU30430___yt    650 TTCCGATAATTTATGTAGACTCGAAATGGGCTGAGAATTCACCATATTAT    699

BSNT_04433___    700 TTAGTGATTCCGGCTATCATGACTATCATCTTCTACATCATCGGCTATAT    749
                     |||||.|||||||||||||||||||||||.||.|||||||||||||||||
BSU30430___yt    700 TTAGTCATTCCGGCTATCATGACTATCATTTTTTACATCATCGGCTATAT    749

BSNT_04433___    750 TAGCTTTGTCAAACTGTCTAATGAAAGAAACGGATATTTCTTCTTATGGA    799
                     |||||||||.|||.||||||||||||||||||||||||||||||||||||
BSU30430___yt    750 TAGCTTTGTTAAAATGTCTAATGAAAGAAACGGATATTTCTTCTTATGGA    799

BSNT_04433___    800 AGCCGCTTAACCGCCCGGTGCAGATCATCGTTATTATCATAGGAATCATG    849
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30430___yt    800 AGCCGCTTAACCGCCCGGTGCAGATCATCGTTATTATCATAGGAATCATG    849

BSNT_04433___    850 GGGTTTGGCTATTTTGGATTTTCTGCCAGCGAGAGCTTTACAGGCTATCT    899
                     ||.||.|||||||||||||||.||||.||||||||||||.|.||.|||||
BSU30430___yt    850 GGCTTCGGCTATTTTGGATTTACTGCAAGCGAGAGCTTTGCCGGTTATCT    899

BSNT_04433___    900 CATTGGCATGGCTGCCGGCGCGGTAATCGGTTTCTTGATTAGTTATTTTG    949
                     |||||||||||.|.|.||.|||||||||||||||||||||||||||||||
BSU30430___yt    900 CATTGGCATGGGTACAGGTGCGGTAATCGGTTTCTTGATTAGTTATTTTG    949

BSNT_04433___    950 CGATTTATAAAAAAATGAAACTTTTGTAA    978
                     |||||||||||||||||||||||||||||
BSU30430___yt    950 CGATTTATAAAAAAATGAAACTTTTGTAA    978


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