Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04432 and BSU30420

See Amino acid alignment / Visit BSNT_04432 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence dna-align/BSNT_04432___ytrE.1.22522.seq
#    -bsequence dna-align/BSU30420___ytrE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04432___ytrE-BSU30420___ytrE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04432___ytrE-BSU30420___ytrE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04432___ytrE
# 2: BSU30420___ytrE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity:     680/696 (97.7%)
# Similarity:   680/696 (97.7%)
# Gaps:           0/696 ( 0.0%)
# Score: 3336.0
# 
#
#=======================================

BSNT_04432___      1 ATGATTGATGTTCAGCATATCGACCATTCTTTCACGATCGGAAAAAAGGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt      1 ATGATTGATGTTCAGCATATCGACCATTCTTTCACGATCGGAAAAAAGGG     50

BSNT_04432___     51 CCGTGAGAATGAAGTTCCAGTATTGAAGGATGTTTCATTACGTGTGGCGA    100
                     |||||||||||||||||||||||||||||||||||||||..|.|||||||
BSU30420___yt     51 CCGTGAGAATGAAGTTCCAGTATTGAAGGATGTTTCATTGAGCGTGGCGA    100

BSNT_04432___    101 AAGGTGAGATCGCCTGTATTGTCGGGCGAAGCGGCTCAGGGAAATCAACG    150
                     ||||.||.||||||||.||||||||.||||||||||||||||||||||||
BSU30420___yt    101 AAGGGGAAATCGCCTGCATTGTCGGACGAAGCGGCTCAGGGAAATCAACG    150

BSNT_04432___    151 CTTTTGAATTTGATTTCCGGCTACATATCGCCGACAAAAGGGCGGATTGT    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU30420___yt    151 CTTTTGAATTTAATTTCCGGCTACATATCGCCGACAAAAGGGCGGATTGT    200

BSNT_04432___    201 CATTAATGGCACTGATGTTACGGGGTTTAATGAAAAGGAATGGGCGCAAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt    201 CATTAATGGCACTGATGTTACGGGGTTTAATGAAAAGGAATGGGCGCAAT    250

BSNT_04432___    251 TTCGGCTTGACCATTTTGGTTTTATTTTCCAAAGTTTTCAGCTCATCCCG    300
                     ||||||||||||||||.||.||||||||.||.||.|||||||||||||||
BSU30420___yt    251 TTCGGCTTGACCATTTCGGGTTTATTTTTCAGAGCTTTCAGCTCATCCCG    300

BSNT_04432___    301 GGTTTAACGACGTATGAGAATGTTGAAATGCCGCTGGCGTTAAAAGGGAT    350
                     |||||||||||||||||||||||.|||||||||||||||||||||||.||
BSU30420___yt    301 GGTTTAACGACGTATGAGAATGTGGAAATGCCGCTGGCGTTAAAAGGAAT    350

BSNT_04432___    351 CAAGCCCTCTGAGCGGAAGCAAAAGGTGCAGGACATGCTGAAACGCGTCG    400
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt    351 CAAGCCATCTGAGCGGAAGCAAAAGGTGCAGGACATGCTGAAACGCGTCG    400

BSNT_04432___    401 GTCTGGAAAACCACGCCGCTCATTATCCGAATGAACTGTCAGGCGGCCAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt    401 GTCTGGAAAACCACGCCGCTCATTATCCGAATGAACTGTCAGGCGGCCAG    450

BSNT_04432___    451 CAGCAGCGTGTCAGTATTGCTCGAGCATTGATTTTAAATCCTTCGATTAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt    451 CAGCAGCGTGTCAGTATTGCTCGAGCATTGATTTTAAATCCTTCGATTAT    500

BSNT_04432___    501 CTTAGCGGATGAGCCGACGGGAAGCCTTGATTCAGAAACGGAACATGAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt    501 CTTAGCGGATGAGCCGACGGGAAGCCTTGATTCAGAAACGGAACATGAAG    550

BSNT_04432___    551 TGCTGGAATTGATCCAGCAGCTGAATCGTGAGCGTGGCATTACATTTGTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt    551 TGCTGGAATTGATCCAGCAGCTGAATCGTGAGCGTGGCATTACATTTGTG    600

BSNT_04432___    601 ATCATTACTCACGATGATGAAGTCGCTTCTATCGGACATTCAAAATTTCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt    601 ATCATTACTCACGATGATGAAGTCGCTTCTATCGGACATTCAAAATTTCA    650

BSNT_04432___    651 GCTTCATGATGGTGTGCTAAAAGGAGGAATTACCGTTGAGGTTTAA    696
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU30420___yt    651 GCTTCATGATGGTGTGCTAAAAGGAGGAATTACCGTTGAGGTTTAA    696


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.