Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04421 and BSU30340

See Amino acid alignment / Visit BSNT_04421 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:08
# Commandline: needle
#    -asequence dna-align/BSNT_04421___ytvA.1.22522.seq
#    -bsequence dna-align/BSU30340___ytvA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04421___ytvA-BSU30340___ytvA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04421___ytvA-BSU30340___ytvA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04421___ytvA
# 2: BSU30340___ytvA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity:     772/786 (98.2%)
# Similarity:   772/786 (98.2%)
# Gaps:           0/786 ( 0.0%)
# Score: 3804.0
# 
#
#=======================================

BSNT_04421___      1 ATGGCTAGTTTTCAATCATTTGGGATACCAGGACAGCTGGAAGTCATCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt      1 ATGGCTAGTTTTCAATCATTTGGGATACCAGGACAGCTGGAAGTCATCAA     50

BSNT_04421___     51 AAAAGCGCTTGATCACGTGCGAGTCGGTGTGGTAATTACAGATCCCGCAC    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt     51 AAAAGCACTTGATCACGTGCGAGTCGGTGTGGTAATTACAGATCCCGCAC    100

BSNT_04421___    101 TTGAAGATAATCCTATTGTCTACGTAAATCAAGGCTTTGTTCAAATGACC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt    101 TTGAAGATAATCCTATTGTCTACGTAAATCAAGGCTTTGTTCAAATGACC    150

BSNT_04421___    151 GGCTACGAAACCGAGGAAATTTTAGGAAAGAACTGCCGCTTCTTACAGGG    200
                     ||||||||.||||||||||||||||||||||||||.||||||||||||||
BSU30340___yt    151 GGCTACGAGACCGAGGAAATTTTAGGAAAGAACTGTCGCTTCTTACAGGG    200

BSNT_04421___    201 GAAACACACAGATCCTGCAGAAGTGGACAACATCAGAACCGCTTTACAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt    201 GAAACACACAGATCCTGCAGAAGTGGACAACATCAGAACCGCTTTACAAA    250

BSNT_04421___    251 ATAAAGAACCGGTCACCGTTCAGATTCAAAACTACAAAAAAGACGGAACG    300
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU30340___yt    251 ATAAAGAACCGGTCACCGTTCAGATCCAAAACTACAAAAAAGACGGAACG    300

BSNT_04421___    301 ATGTTCTGGAATGAATTAAATATTGATCCAATGGAAATAGAGGATAAAAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt    301 ATGTTCTGGAATGAATTAAATATTGATCCAATGGAAATAGAGGATAAAAC    350

BSNT_04421___    351 GTATTTTGTCGGAATTCAGAAAGATATCACCAAGCAAAAAGAGTATGAAA    400
                     |||||||||||||||||||||.||||||||||||||||||||.|||||||
BSU30340___yt    351 GTATTTTGTCGGAATTCAGAATGATATCACCAAGCAAAAAGAATATGAAA    400

BSNT_04421___    401 AGCTTCTCGAGGATTCCCTCACGGAAATTACTGCACTTTCAACTCCTATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt    401 AGCTTCTCGAGGATTCCCTCACGGAAATTACTGCACTTTCAACTCCTATT    450

BSNT_04421___    451 GTCCCGATTCGCAATGGCATTTCGGCTCTTCCGCTAGTCGGAAACCTGAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt    451 GTCCCGATTCGCAATGGCATTTCGGCTCTTCCGCTAGTCGGAAACCTGAC    500

BSNT_04421___    501 AGAGGAGCGATTTAATTCCATTGTTTGCACATTGACGAATATCTTATCAA    550
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU30340___yt    501 AGAGGAGCGATTTAATTCCATCGTTTGCACATTGACGAATATCTTATCAA    550

BSNT_04421___    551 CATCCAAAGATGATTATTTGATCATTGATTTATCCGGATTGGCCCAAGTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt    551 CATCCAAAGATGATTATTTGATCATTGATTTATCCGGATTGGCCCAAGTG    600

BSNT_04421___    601 AACGAACAAACGGCCGACCAAATTTTCAAGCTGAGCCATTTGCTGAAATT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30340___yt    601 AACGAACAAACGGCCGACCAAATTTTCAAGCTGAGCCATTTGCTGAAATT    650

BSNT_04421___    651 GACCGGAACTGAGTTAATCATTACCGGCATTAAGCCTGAATTGGCCATGA    700
                     ||||||||||||||||||||||||.||||||||||||||||||||.||||
BSU30340___yt    651 GACCGGAACTGAGTTAATCATTACTGGCATTAAGCCTGAATTGGCTATGA    700

BSNT_04421___    701 AAATGAATAAATTGGATGCCAATTTTTCATCGCTGAAAACATTTTTAAAT    750
                     |||||||||||.||||||||||||||||.|||||||||||||.||.||||
BSU30340___yt    701 AAATGAATAAACTGGATGCCAATTTTTCGTCGCTGAAAACATATTCAAAT    750

BSNT_04421___    751 GTAAAGGATGCCGTTAACGTGCTTCCGATTATGTAA    786
                     |||||||||||||||||.||||||||||||||||||
BSU30340___yt    751 GTAAAGGATGCCGTTAAAGTGCTTCCGATTATGTAA    786


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